Plasmodium chabaudi: PCHAS_0201300
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Entry
PCHAS_0201300 CDS
T01108
Name
(RefSeq) transcription initiation factor TFIIB, putative
KO
K03124
transcription initiation factor TFIIB
Organism
pcb
Plasmodium chabaudi
Pathway
pcb03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pcb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PCHAS_0201300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcb03021
]
PCHAS_0201300
Transcription machinery [BR:
pcb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
PCHAS_0201300
Prokaryotic type
Archaeal type
TFB
PCHAS_0201300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
zf-C2HC5
ArfGap
Motif
Other DBs
NCBI-GeneID:
3494034
NCBI-ProteinID:
XP_016653059
UniProt:
A0A077TGD3
LinkDB
All DBs
Position
2:complement(98365..99741)
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AA seq
365 aa
AA seq
DB search
MSSFYNKNLSLSPSNGKAYPARISGNNEAGNINRRLFRSFRSTKNDMCPDCKEKGIIICD
TSEGTQICNGCGLVVESNILSEEQEWRNFSNDGQSKGNDRNRVGEVSDIWLENNLTSTTF
IKSSKKLQHLNMMTQINKNDQTLLSAFNILKLICETFFLRSNVIERAKEITKELQDMEQL
KNRINNLNMLAVVYLACREAGHIKSIKELITFDRSYKEKDLGKTINKLKKVLPSRAFVYN
ENISHLIYSLSNRLQLSTDLIEAIEYVVKKATTLITTSHRLNSLCGGSIHLIVELNTSEE
KNVKLPHLSQIASVCGVTTNTLKTTFKELLAASEYILPKNYLKDNNTKLVILKHKYLHDD
KKKRR
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcattttataataaaaatttgtctttaagtccttcaaatggcaaagcttatcca
gcaagaataagtggaaataatgaagctggtaatataaatcgaaggttgtttcgttccttt
cgaagtaccaaaaatgatatgtgcccagattgtaaagaaaaaggaataataatatgcgat
acaagtgaagggacacaaatatgtaatggatgtggtttggttgtagaaagtaatatacta
tctgaagaacaggaatggagaaattttagcaatgatggtcaatcaaaaggcaatgataga
aatcgtgttggtgaagtcagtgatatatggttagagaataatttaactagtaccactttt
attaaatcaagtaaaaaattacaacaccttaacatgatgacacaaataaataagaatgat
caaacattattatctgcttttaatattttaaaattaatttgtgaaacattttttttgagg
agcaatgtgattgagcgtgctaaagagataacaaaggagttgcaggacatggagcagcta
aagaatcgaataaacaacctgaacatgctagctgttgtttatcttgcttgtagagaagcg
gggcatataaaaagtatcaaggaattaattacatttgatagatcttataaagaaaaagac
ttaggaaaaacaataaataaattaaaaaaagtattaccatctcgagcttttgtttataat
gagaatatatcacatttaatctattcattatcaaataggttacaattatctacagatttg
atagaggctatagaatatgttgtaaaaaaggctacaacattgattactacatctcataga
ttaaattcgttatgtggtggttcgattcatttaattgttgaattaaatacaagtgaagaa
aagaatgtaaaattaccacatctatcacaaattgcatctgtttgtggtgtcacaacaaat
actcttaaaacaacctttaaagaattgctagctgcatctgaatacattttaccaaaaaat
tatttgaaggataataatacaaaacttgtcatactcaaacataaatatttacatgatgat
aaaaaaaagaggcgataa
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