Plasmodium chabaudi: PCHAS_0201400
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Entry
PCHAS_0201400 CDS
T01108
Name
(RefSeq) chromatin assembly factor 1 protein WD40 domain, putative
KO
K10752
histone-binding protein RBBP4
Organism
pcb
Plasmodium chabaudi
Pathway
pcb03082
ATP-dependent chromatin remodeling
pcb03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pcb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
PCHAS_0201400
03083 Polycomb repressive complex
PCHAS_0201400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcb03036
]
PCHAS_0201400
Chromosome and associated proteins [BR:
pcb03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
PCHAS_0201400
Histone modification proteins
HAT complexes
HATB complex
PCHAS_0201400
HDAC complexes
Sin3A-HDAC complex
PCHAS_0201400
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
PCHAS_0201400
PRC2.2
PCHAS_0201400
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
PCHAS_0201400
Heterochromatin formation proteins
Other heterochromatin formation proteins
PCHAS_0201400
Chromatin remodeling factors
NuRD complex
PCHAS_0201400
NuRF complex
PCHAS_0201400
NuRF complex (fruit fly)
PCHAS_0201400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
CAF1C_H4-bd
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_NUP159_NUP214
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
Beta-prop_HPS5
WD40_RFWD3
MIOS_WD40
VID27
WDR90_beta-prop_4th
WDR54
Beta-prop_Vps41
WD_LRWD1
Beta-prop_VPS8
Beta-prop_WDR11_2nd
Motif
Other DBs
NCBI-GeneID:
3499249
NCBI-ProteinID:
XP_746122
UniProt:
A0A077TK37
LinkDB
All DBs
Position
2:102920..104260
Genome browser
AA seq
446 aa
AA seq
DB search
MNALKECKKRKSNALDEACLELSEGPNNEEITQEEVEDVETQFSNWKTNSGLLYDFVCRK
ELEWPSLSMDFGDYSEENIKDNVLNQIVCVGTHTSNNEPNYLYVCDVLFPLERLPQDKCV
YKINESYEGFDFCPEKNKITIKSKIYHEGEVNRIRFLPLEKKHIVVTKAIDGNLHLFDIN
KHSIDDATSSDSRKMIPEISFIGNNSDGFGLEFNTLKKHALTCGNDGSINVYDYHDLSAK
TLSPFYSVKYKSAINDISPTNDPNLILACADDGYILMYDLRIKATEPAQQVLGQQVPVNA
ISLNTFTGHFASGSDNGKIKVWDIKKFNEPAHIINAHKEAIIRLNFSPNDASILASASNN
RFINVYDLNKIGEELDAIDLSDGPSELIFSHGGHTQPITDFNWNHHKKLKMFIGSTAEDN
TLQFWQLKTELLDEEHTVSTSNTDVE
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcccttaaagagtgcaagaaaagaaaatcgaatgccttagacgaagcttgctta
gaattaagtgaaggtccaaacaatgaagaaataacacaagaagaagtcgaagatgttgaa
actcaattttcaaattggaaaacaaacagtggattattatatgattttgtttgtagaaag
gaattagaatggccatctttatcaatggattttggtgattatagtgaagaaaatatcaaa
gataatgttttaaatcaaatagtatgtgtaggaacccatacatctaataatgaacccaat
tatttatatgtatgtgatgttttattcccacttgaacgattaccacaagataaatgtgtt
tataaaataaatgaaagctatgaaggttttgatttctgtccagaaaaaaataaaattaca
attaaatcgaaaatatatcatgaaggagaagtaaatagaatccgatttttacctttagaa
aaaaaacatattgttgttactaaagcaatcgatggaaatctacatctatttgatataaat
aaacatagtatagatgatgccacaagtagtgattcaagaaaaatgatcccagaaatttca
tttattgggaataattcagatggttttggacttgagtttaatactttgaaaaaacatgca
ttaacttgtggtaatgatggaagtataaatgtatatgactatcatgatttaagtgcaaaa
acattgagcccattctattcagtaaaatataaatcagcaattaatgatatctctccaaca
aatgatcctaatttaatattagcatgtgcagatgatggatacattttaatgtatgatctt
agaattaaagcaacagaaccagctcaacaagttttaggtcaacaagttcctgttaatgct
atctctttgaatacatttactggacattttgcatctggaagtgataatggaaaaattaaa
gtatgggatattaaaaagttcaatgaacctgcacatatcattaatgcacacaaagaagct
attatcagattaaacttctctccaaatgatgcttctatacttgcatctgcaagtaataat
cgttttattaacgtttatgatctaaataaaatcggtgaagagttagatgcaatagattta
tcggatggtccatctgaacttatcttttctcatggtggtcatacacaacctataacagat
tttaattggaatcaccacaaaaaattaaaaatgttcataggttcaacagcagaagacaat
accttacaattctggcaattaaaaactgaattacttgatgaggaacatactgtttcgaca
tctaatacagatgtagaataa
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