Plasmodium chabaudi: PCHAS_0301700
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Entry
PCHAS_0301700 CDS
T01108
Name
(RefSeq) CIR protein
Organism
pcb
Plasmodium chabaudi
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cir_Bir_Yir
DNA_pol_phi
DUF2448
Motif
Other DBs
NCBI-GeneID:
3493378
NCBI-ProteinID:
XP_016653141
UniProt:
A0A4V0K3Q0
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Position
3:complement(53308..58207)
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AA seq
1553 aa
AA seq
DB search
MDTESYKLFREVDKLFDEKSVNVGKFNTYQDVADYCPEKNGYKSCDNDYERINAIGGHLI
KQLYFKNSSINGGNNNNRFIEYFIMWLSHILYRKLEDHTITLKSAYKKHLKDNFGEFRHW
YLLQDKKYLTNSNMAIMNLIYLFFQQICDTIKIYKKPHVLGHEYASKAFECYFIYDKISK
LIKRCGPYIELLDHLRTIYNEFIKRVKREHHHGDILDRLMELPEIDKTKLGCKFKTGRCI
RLHQKLEKSNSKIIKLGIKMLKDDAKRRIRRRSNSIASQDTEDDDDDDDDDDDNDDDDDD
GDDDSDSDSDSDSDSDSDSDSDGDDVNDDADAVDDDDNDPDAAYYDAIIKKFLSQLENSQ
QGTSPVPAPQQTHQGHQAQAPAAKKSVPPQTAPAKPALAKPAPPQTAAAKPALAKPAPPQ
TAAAKPALAKPAPPQTAAAKPAATKPAATKPVSAKPATTKPALAKPAPPQTAAAKPAPPQ
TAAAKPAPPQTAAAKPAPAKPAATKPAATKPVSAKPEPAQTVSVKPTPAKPAPAQTAAAQ
STKQSPSTLKFTSPGTSTTISSGTKLSMNTAPSTPKISENVKLEVSHQQTEPKVPSAKLG
STQVAPLKLGRSAESPQTQKETSIPPAQTKRQPPSRPNTSEASPQPPPAKPPAKPPAKPP
AKPPAKPPAKPAPAQTRTVKPAPEKSPKKPPSTASGASTTISEGIKVSINTTPSTTTNQT
PVQPKSKILSSATSGTISTTSSSLNLSPSVTTSASSKTSTSVTTSASSKTSTSVTTSASS
KTSTSVTTSASSKTSTSVTTSTSSKISTPTEASHVKSQQISNTISPDTTSSTPIKSELEK
STPRQLAPAKPEDPPQAQPLKASLKALVSTIPGIGTASSTSATLSADATVSTGEKAGTTI
LPIKTSLSEQNDTQQILYRTKRSPDPESLTNIPTPGSGNTGGQSSSQHITAENSGISSKK
DTQPQMSQVNSSLLNHQPQGANGKEKNQSLKLNDQGNQPENAPSMPNNGSSASLDIHNKV
RTTQNNTNIGINNLKNPTNDPNSQQKNLGTKQGPQNTVSENQGIESNISEGGINTDNQSQ
KVSPEAKSTITSLTISVTAPSSLPPSQSSSAMPSDTTSNTRESSPKIVLQPQPSITLPSS
ASGTTKTAPIITTVSGGEKVKSDMSSMENTLHSQDDITKRSSRARRSANPGNQIYTPTTG
SGTTSDAANTQITDSQAQANQTQNLLKNITDVKVKEASSIWCISSNKKCNIIGIGIIGIS
IFAFIAFMFKYLSFGSRKKSKKKKITKKVINLVDGRKMEKTFIKSIDREKKSNIIINSGD
NKKLAKIIINSDDTNKPIKMAINPWDEKRMTHITINSDDNINPIKKVINPWDEKRMTHIT
INSDDTNKPIKMAINPWDEKRMTHITINSDDNINPIKKVINPWDEKRMTHITINSDDNIN
PIKKVINPWDEKRMTHITINSDDNINPIKKVINPWDEKQMTDITINSENTKKYTKSVINS
GDRKKTKIIVNSVNEKISLLNIYKFMKADPMPFINLFFLLIFFVYKRKRNTIE
NT seq
4662 nt
NT seq
+upstream
nt +downstream
nt
atggacacagaatcgtataaactatttcgtgaagttgataaactttttgatgagaaatct
gttaatgtgggaaaatttaacacttaccaggatgtagccgattattgccctgaaaaaaat
ggatataaaagttgtgataatgattatgaaagaatcaacgctattggaggacatttaatt
aagcaattatattttaaaaattccagtataaatggagggaacaataataatagatttatt
gaatactttattatgtggttaagtcatatattatacaggaaattagaagatcataccatt
actttaaagtcggcttataaaaaacatttaaaggataattttggagaatttaggcattgg
taccttttacaagataaaaagtatctgacgaattctaatatggcaattatgaatttgatt
tatcttttttttcagcaaatttgtgatacaattaagatatataaaaaaccacatgtatta
ggacacgaatatgcaagcaaggcctttgaatgttattttatatatgataaaatttctaaa
ttgattaaacgttgtggcccgtatattgaattattggatcatttaagaacaatatataac
gaatttataaaaagggttaaaagggaacatcaccatggagatatacttgatcggcttatg
gagcttccagagatagataaaaccaagttgggatgtaaattcaaaactggaagatgcata
cgattgcatcaaaagttagaaaaaagcaattccaagattataaaattgggaattaaaatg
ttaaaggatgatgcaaaaagaagaatccgaagaagatctaattcaatagcatctcaagat
acggaagatgatgacgacgatgatgacgatgatgacgataatgatgatgatgatgatgat
ggtgacgatgatagtgatagtgacagtgatagtgacagtgatagtgacagtgatagtgat
agtgatggtgatgatgttaatgacgatgctgatgctgttgacgatgatgataatgatcct
gatgctgcttattatgatgcgatcataaaaaaatttttaagtcaattagaaaatagccaa
caaggaacatcacctgtaccagcaccgcaacaaacacaccaaggacatcaagcacaagca
cctgcagctaaaaaatcagtacctccacaaacagctcctgcaaaaccagctcttgcaaaa
ccagcacctccacaaacagcagctgcaaaaccagctcttgcaaaaccagcacctccacaa
acagcagctgcaaaaccagctcttgcaaaaccagcacctccacaaacagcagctgcaaaa
ccagcagctacaaaaccagcagctacaaaaccggtatctgcaaaaccagcaactacaaaa
ccagctcttgcaaaaccagcacctccacaaacagcagctgcaaaaccagcacctccacaa
acagcagctgcaaaaccagcacctccacaaacagcagctgcaaaaccagctcctgcaaaa
ccagcagctacaaaaccagcagctacaaaaccggtatctgcaaaaccagaacctgcacaa
acagtatctgtaaaaccaactcctgcaaaaccagcacctgcacaaacagcagctgcacaa
tcaacaaaacaatcaccaagcactttaaaatttacatcacctggaacaagtacaacaata
tcatcaggtacaaaattatcaatgaatacagcgccatcaacacctaaaatatcagaaaat
gtaaaactagaagtatcacaccaacaaacagaaccaaaagtaccatctgcaaaactagga
tctacacaagtagcacctttaaaactaggacgatcagcagaatcaccacagacacaaaaa
gaaacaagcataccacctgcacaaacaaaacgacagccaccatcaagacctaacacatca
gaagcatcgccacaaccaccacctgcaaaaccacctgcaaaaccacctgcaaaaccacct
gcaaaaccacctgcaaaaccacctgcaaaacctgcacctgcacaaacaagaactgtaaaa
ccagctcctgaaaaatcaccaaaaaaaccaccatcgacagcatctggagcaagtacaacg
atatcagaaggtataaaagtatcaataaatacaacaccatcaacaactacaaatcaaaca
cctgtacaaccgaaatcaaaaattttatcatcggcaacatctggaacaatttcaacaaca
tcatccagtctaaatctatcaccaagtgtaacaacatcagccagttcaaaaacatcaaca
agtgtaacaacatcagccagttcaaaaacatcaacaagtgtaacaacatcagccagttca
aaaacatcaacaagtgtaacaacatcagccagttcaaaaacatcaacaagtgtaacaaca
tcaaccagttcaaaaatatcaacacctacagaagcatcacatgtaaaatcacaacaaata
tcaaatactatatcaccagatacaacgtcatcaacacctataaaatcagaattggagaaa
tcaacacctagacaactagcacctgcaaaaccagaagacccaccacaagcacagccatta
aaagcatcgctcaaagctttagtatctacaatacctggaataggtacagcatcgtcaacg
agtgcaacactgtcagcagatgcaactgtatcaacaggtgaaaaggctgggacaactatt
ttaccaataaaaacctcattgtctgaacaaaatgatactcaacaaattttatatcgaaca
aagagatcacccgatcctgaaagtttaacaaatattccaacacctggatcaggaaataca
ggaggtcaatcatcaagtcagcatattacagcagaaaattcagggattagttcaaaaaaa
gatacacaaccacaaatgagtcaagtgaatagttcattattaaaccatcaaccacaaggc
gcaaacggaaaagaaaaaaaccaatcattgaaattaaatgatcaagggaatcaaccagaa
aatgcaccaagtatgccaaacaatggatcgagtgcatcactcgatatacataacaaagta
agaaccactcaaaataatacaaatattggaataaataacttaaaaaacccaacaaatgac
ccaaatagtcaacagaaaaacttaggaactaagcaaggaccccaaaatactgtttcagaa
aatcagggtattgaatccaatatttcagagggtgggataaatacagataatcaatcacaa
aaagtttctccagaagctaaatcaacaattacatcactaactatatcagtaactgcgcca
tcatctctaccaccatctcaatcatcatcagctatgccatcagatacaacatcaaacaca
cgagaatcatctccaaagatagtattgcaaccacaaccatcaataactttaccatcttca
gcatctggaacaactaaaacagcaccaataattacaactgtgtcaggaggtgaaaaggtt
aagtcagatatgtcatcaatggaaaacacattgcatagtcaagatgatattacaaaacga
tcatctcgagcaaggagatcagccaatcctggaaatcaaatatatactccaacaactgga
tcaggaactacatcagatgcagcaaacacacaaataacagattcacaagcacaagctaac
caaacacaaaatttattaaaaaacataactgacgttaaagtgaaagaagcatcatcaata
tggtgtatatcatcaaataaaaaatgtaatataataggtattggtattataggcatttca
atattcgcgtttatagcatttatgtttaagtatttatcatttggatcgagaaaaaaatcg
aagaaaaaaaaaatcacgaaaaaagttataaatttggttgatggaaggaaaatggaaaaa
acatttataaaatcaattgatagagaaaaaaaatcgaatataattataaattcaggagat
aataaaaaactagcgaagataattataaattccgatgatacaaacaaaccaataaaaatg
gcgataaatccatgggatgaaaaacgaatgacacatataactataaattcagatgataat
atcaatccaataaaaaaggtgataaatccatgggatgaaaaacgaatgacacatataact
ataaattcagatgatacaaacaaaccaataaaaatggcgataaatccatgggatgaaaaa
cgaatgacacatataactataaattcagatgataatatcaatccaataaaaaaggtgata
aatccatgggatgaaaaacgaatgacacatataactataaattcagatgataatatcaat
ccaataaaaaaggtgataaatccatgggatgaaaaacgaatgacacatataactataaat
tcagatgataatatcaatccaataaaaaaggtgataaatccatgggatgaaaaacaaatg
acagatataactataaattcagaaaatacaaaaaaatatacaaaatccgttataaattca
ggcgatagaaaaaaaacaaaaataattgtaaattcagttaatgagaaaatatcattatta
aatatatacaaatttatgaaagccgatcctatgccatttattaatttgttttttttgtta
attttttttgtctacaaaagaaaaagaaacactatagaatga
DBGET
integrated database retrieval system