Plasmodium chabaudi: PCHAS_0314800
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Entry
PCHAS_0314800 CDS
T01108
Name
(RefSeq) DEAD/DEAH box helicase, putative
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
pcb
Plasmodium chabaudi
Pathway
pcb03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pcb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
PCHAS_0314800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcb03021
]
PCHAS_0314800
03036 Chromosome and associated proteins [BR:
pcb03036
]
PCHAS_0314800
Transcription machinery [BR:
pcb03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
PCHAS_0314800
Chromosome and associated proteins [BR:
pcb03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
PCHAS_0314800
Chromatin remodeling factors
BAF complex
PCHAS_0314800
PBAF complex
PCHAS_0314800
GBAF(ncBAF) complex
PCHAS_0314800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
DEAD
Motif
Other DBs
NCBI-GeneID:
3499372
NCBI-ProteinID:
XP_016653220
UniProt:
A0A4V0K414
LinkDB
All DBs
Position
3:<508485..>512699
Genome browser
AA seq
1404 aa
AA seq
DB search
MIGNCDKENLEDESENYTIPLCHKNEKDKYDNITSIGKSIMCKSSHRIETSVNNEIEKEK
ELDISKYVYLSEHLQIRKDKQISMSSSLNKYINDNINFIRHFTESNKSLEVSKKDVSKQF
VDIGVKIRFLLYRDKIKKYKKYKKKYEEKNAMKLKRLGNNVNELYEKVITSKQDTISNQG
VSTHCGNESNCSDSSCLLSDSSIENGNKVPKNVEGQDHRIIKHFNYKESDLHTIKRLEKN
KNKYFEYLDSMYIKYGMLNNMNISYFQNIQNIINKNVSDINITDKVDNEMKNIKQFFSNQ
KTIKNIEKNQNMLRTDILNAMFGFNIISDTQCMKLPIKYINRDYEYKHKEGSVKNDGLYD
HDLISKSVDNERNPFLPKLRNVKEGKKGKEVTTKSRNNKVVKKAENIIDKNTKEKICEYI
YGLQKKNCKMNGKIKSLKQYVLLNNWKDFKNHNIYINMIDRQKKENEKLFATLCYDQMNY
IKEKKQIILEKEEKERLKLLRENNMDEYIKLIKNVKNKRIQELLDVTDKFLNTMSHSVLH
QKGEAASTLSTASKENTNAREKYYDIAHTIKEKITKQPSILVGGNLMKYQLEGLEWLVSL
HNNNLNGILADEMGLGKTVQTISLFAYLKELEGGEASSQFKMHNEVGKNLIIVPLSTLPN
WSNEFEKWCPSLNVIIYKGNKNERKDISKVLLEENYDICLTTFDIIIREKNILGKISWSY
IIIDEGHRMKNDKSKLHSILSLFISKHRILLTGTPLQNNMTELWALLNFILPKIFSSSSN
FEEWFSLPLCNEKNVYESMTEEEELLIINRLHTILLPFMLRRLKKDVLEFLPKKYEYNIY
VQLSLYQKLLYKQIEEKTFKQVNSDGTVNTKSFQNTIMQLRKIVNHPFLFTNNYDINDCI
IKSSGKFEVLDRMIPKLIKFKHKILLFCQMTRVMDILCDYFELRRYKYHRLDGSVSLSDR
RQIIDNFNEPKSVNNCKEIDQNDINDLSNQELDTDEAMIFILSTRSGGLGLNLQAADTVI
IFDSDFNPHQDIQAMCRCHRIGQKNVVKVFRFITLSSVEELVFQRAKDKLNINDKVIQAG
LFNKIYNDNDRQTKLKNIIKKNQKYDTTLQPTNPIMLNEYMSRTPEELEYFLNFDRNYFG
EDLFVLLQSMRQRETQKSQFRYVSEDEEEGEEKEEETAANVDAGDAANADNADDADQIEQ
ILIKSNKLVNEAELPVHLFCEDIVEKPEINFKRTRKVINYNLMYEEELTEDQFCELIDPD
SPQPLSQNNVNDPIEIQDCIENEQTSDVVLLENQTDDAVLLDNNQKEEQNRKGEMTDIET
IYLEEDQRKDEYELDNQDKQTDVEREENGIKKRKGDENSVNNFEKKYSEFSEMFDMLNVS
TKLQEDEKENRENKKRKKISGHEM
NT seq
4215 nt
NT seq
+upstream
nt +downstream
nt
atgattggaaattgtgataaagaaaatttagaggacgagtcggaaaattataccataccc
ctttgtcacaaaaatgaaaaagacaagtatgataatataactagcattggcaaaagtata
atgtgtaaatcttcgcatagaattgaaacaagtgtaaataatgaaattgaaaaagaaaag
gaattggacatatctaagtatgtctatttaagcgaacatttacaaatacgaaaagataaa
cagatttctatgagctcatcattaaataaatatataaatgataatataaattttattaga
cattttactgaaagtaataaatcgttggaagtttcaaaaaaggatgtatcaaaacaattt
gtggatataggggtaaaaatacgatttttactttatagagataaaattaaaaaatataaa
aaatacaaaaaaaagtatgaagaaaaaaatgcaatgaaattaaaaaggttaggaaataat
gtaaacgagttatatgaaaaagttatcacatctaaacaagatactatatcaaaccaaggt
gtttcaacccattgtgggaacgaatctaactgttcagatagtagctgtctactatccgat
tcatcaatcgaaaatggaaacaaagttccaaagaatgtagaaggtcaagatcatcgaatt
ataaagcatttcaattataaggaaagtgatttacatactattaaaaggttggaaaaaaat
aaaaataaatattttgaatatctagatagtatgtatataaaatatggaatgcttaacaat
atgaatatttcttattttcaaaacatccaaaatattattaataaaaatgtttcagatatt
aatataacagataaagtagacaacgaaatgaaaaacattaaacaatttttttcaaatcaa
aaaactattaaaaatattgaaaaaaatcaaaatatgctaaggaccgatattttaaatgca
atgtttggatttaatataattagtgatacccaatgtatgaaacttccaataaaatatata
aatcgtgattatgaatataaacataaagaaggttcagtcaaaaatgatggtctatatgac
cacgacttaatctcaaaaagtgttgacaatgaacgaaacccgtttttgccaaagcttaga
aatgtaaaggaagggaaaaaaggaaaagaggttactacaaaaagtagaaacaataaggtt
gtgaaaaaagctgaaaatattattgacaaaaatacgaaagagaaaatatgtgaatatata
tatgggttgcaaaaaaaaaattgtaaaatgaatgggaaaataaaaagtttaaaacaatat
gtattattaaataattggaaagactttaaaaatcacaatatatatataaatatgatagat
cgtcaaaaaaaagaaaatgaaaagttatttgcaactttatgttatgatcaaatgaattat
ataaaagaaaaaaaacaaatcattttagaaaaggaagaaaaagaacgattaaaattgtta
agagaaaataatatggatgaatatattaaattaattaaaaatgtaaaaaataaaagaata
caagaattgttagatgtaacagataaatttcttaatactatgtctcactctgtattgcat
caaaaaggggaagcagcttctactctttctactgcatctaaagagaatactaatgctaga
gaaaagtattatgatattgcccacactattaaagagaaaattacaaaacagccatccata
ttagttggtggaaatttaatgaagtatcaattagagggtcttgaatggctagtctcttta
cataataacaatctgaatggaattttggcggatgagatggggttaggaaaaacagtgcag
acgataagtttgtttgcttatctgaaagagttagaagggggtgaagcctctagccaattt
aaaatgcataacgaggttggaaaaaacttgatcatcgtcccgttgtccactctgccaaac
tggtcaaacgaatttgaaaaatggtgtccatctttaaatgttataatctataaagggaat
aaaaacgaaagaaaagatattagtaaagtgttgctagaagaaaactatgatatttgttta
actacatttgatattataattcgagaaaaaaatatactaggaaaaatatcttggagttat
ataataatagatgaaggacatagaatgaaaaatgataaatcaaaacttcattctattctt
tcattgtttattagtaaacatcgtatattattaactggtacacctttacaaaataatatg
actgaactatgggctctcttaaattttatacttccaaaaatcttttcttcgtcatcaaat
tttgaagaatggttttcactcccattatgtaatgaaaaaaatgtttatgaatctatgact
gaggaagaagaattacttattattaatcggttgcatactatactcttaccttttatgctt
agacgtttgaaaaaggatgtacttgaatttttgccaaaaaaatatgaatataatatatat
gtacaattatcgttatatcaaaaattgttatacaaacagattgaagaaaaaacttttaaa
caggttaattctgatggtacagtaaatacaaaatcatttcaaaatacaattatgcaatta
cgtaaaattgttaatcatccatttctatttacaaataattatgatattaatgattgtata
ataaaatcaagtggtaagtttgaagtgcttgatagaatgataccaaaattaataaaattt
aaacataaaatattattgttttgtcaaatgacaagagtaatggatatcctttgtgattat
tttgaacttcgaagatataaatatcatagacttgatggtagtgtcagcttatcagatcgt
agacaaattatcgacaattttaatgaacctaagtctgtgaataattgtaaagaaattgat
caaaatgatatcaatgatttatcaaatcaagaattagatactgatgaagctatgatattt
atactttctacaagatctggaggtttagggctaaatttacaagcagcagatactgtaatt
atatttgatagtgattttaatcctcaccaagatattcaagcaatgtgtcgatgccacaga
ataggacaaaaaaatgttgtgaaagtttttcgatttatcacactttcaagtgtagaggag
ttagtctttcaaagggcaaaagataaactcaatataaatgataaagttatacaagcagga
ttatttaataaaatatataatgacaatgatagacaaacaaaattaaaaaatattattaaa
aaaaatcaaaaatatgatactactcttcaaccaacgaatcctatcatgctcaatgaatat
atgagtagaactccagaggaactcgaatattttcttaactttgatcgaaactattttggt
gaagacctgttcgtactcttgcagtctatgcgtcagagggagacacaaaagtcccagttc
cgctacgtcagcgaagacgaggaagaaggagaggaaaaggaagaagaaactgctgccaac
gttgatgctggtgatgccgctaatgctgacaatgctgacgacgctgaccagattgagcaa
attttgataaaatcgaacaagctagtcaacgaggcggagttaccagttcatctattttgt
gaagacattgttgaaaaacctgaaataaattttaagagaacacgaaaagtaattaattat
aatcttatgtatgaagaagagttaactgaagatcagttctgtgaattgatcgatccagat
tcccctcagccattatctcaaaataatgtcaatgaccctattgaaattcaagattgcata
gaaaacgaacaaacgagtgatgtcgtacttttagaaaaccaaacggacgatgccgtactt
ttagataataatcagaaagaggaacaaaataggaaaggtgaaatgaccgatatagaaact
atttatcttgaagaggatcaaagaaaagatgaatatgagttggacaatcaggataagcaa
acggatgtggaaagagaagaaaatggtattaagaaacgaaagggagatgaaaatagtgtc
aacaattttgaaaaaaaatattcagaattttctgaaatgtttgatatgttaaatgtttca
acaaaattacaagaagatgaaaaagaaaacagagaaaacaaaaaacgaaaaaaaattagt
ggacatgaaatgtag
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