KEGG   Plasmodium chabaudi: PCHAS_0314800
Entry
PCHAS_0314800     CDS       T01108                                 
Name
(RefSeq) DEAD/DEAH box helicase, putative
  KO
K11647  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
pcb  Plasmodium chabaudi
Pathway
pcb03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:pcb00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    PCHAS_0314800
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pcb03021]
    PCHAS_0314800
   03036 Chromosome and associated proteins [BR:pcb03036]
    PCHAS_0314800
Transcription machinery [BR:pcb03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     PCHAS_0314800
Chromosome and associated proteins [BR:pcb03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    REST complex
     PCHAS_0314800
  Chromatin remodeling factors
   BAF complex
    PCHAS_0314800
   PBAF complex
    PCHAS_0314800
   GBAF(ncBAF) complex
    PCHAS_0314800
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C DEAD
Other DBs
NCBI-GeneID: 3499372
NCBI-ProteinID: XP_016653220
UniProt: A0A4V0K414
LinkDB
Position
3:<508485..>512699
AA seq 1404 aa
MIGNCDKENLEDESENYTIPLCHKNEKDKYDNITSIGKSIMCKSSHRIETSVNNEIEKEK
ELDISKYVYLSEHLQIRKDKQISMSSSLNKYINDNINFIRHFTESNKSLEVSKKDVSKQF
VDIGVKIRFLLYRDKIKKYKKYKKKYEEKNAMKLKRLGNNVNELYEKVITSKQDTISNQG
VSTHCGNESNCSDSSCLLSDSSIENGNKVPKNVEGQDHRIIKHFNYKESDLHTIKRLEKN
KNKYFEYLDSMYIKYGMLNNMNISYFQNIQNIINKNVSDINITDKVDNEMKNIKQFFSNQ
KTIKNIEKNQNMLRTDILNAMFGFNIISDTQCMKLPIKYINRDYEYKHKEGSVKNDGLYD
HDLISKSVDNERNPFLPKLRNVKEGKKGKEVTTKSRNNKVVKKAENIIDKNTKEKICEYI
YGLQKKNCKMNGKIKSLKQYVLLNNWKDFKNHNIYINMIDRQKKENEKLFATLCYDQMNY
IKEKKQIILEKEEKERLKLLRENNMDEYIKLIKNVKNKRIQELLDVTDKFLNTMSHSVLH
QKGEAASTLSTASKENTNAREKYYDIAHTIKEKITKQPSILVGGNLMKYQLEGLEWLVSL
HNNNLNGILADEMGLGKTVQTISLFAYLKELEGGEASSQFKMHNEVGKNLIIVPLSTLPN
WSNEFEKWCPSLNVIIYKGNKNERKDISKVLLEENYDICLTTFDIIIREKNILGKISWSY
IIIDEGHRMKNDKSKLHSILSLFISKHRILLTGTPLQNNMTELWALLNFILPKIFSSSSN
FEEWFSLPLCNEKNVYESMTEEEELLIINRLHTILLPFMLRRLKKDVLEFLPKKYEYNIY
VQLSLYQKLLYKQIEEKTFKQVNSDGTVNTKSFQNTIMQLRKIVNHPFLFTNNYDINDCI
IKSSGKFEVLDRMIPKLIKFKHKILLFCQMTRVMDILCDYFELRRYKYHRLDGSVSLSDR
RQIIDNFNEPKSVNNCKEIDQNDINDLSNQELDTDEAMIFILSTRSGGLGLNLQAADTVI
IFDSDFNPHQDIQAMCRCHRIGQKNVVKVFRFITLSSVEELVFQRAKDKLNINDKVIQAG
LFNKIYNDNDRQTKLKNIIKKNQKYDTTLQPTNPIMLNEYMSRTPEELEYFLNFDRNYFG
EDLFVLLQSMRQRETQKSQFRYVSEDEEEGEEKEEETAANVDAGDAANADNADDADQIEQ
ILIKSNKLVNEAELPVHLFCEDIVEKPEINFKRTRKVINYNLMYEEELTEDQFCELIDPD
SPQPLSQNNVNDPIEIQDCIENEQTSDVVLLENQTDDAVLLDNNQKEEQNRKGEMTDIET
IYLEEDQRKDEYELDNQDKQTDVEREENGIKKRKGDENSVNNFEKKYSEFSEMFDMLNVS
TKLQEDEKENRENKKRKKISGHEM
NT seq 4215 nt   +upstreamnt  +downstreamnt
atgattggaaattgtgataaagaaaatttagaggacgagtcggaaaattataccataccc
ctttgtcacaaaaatgaaaaagacaagtatgataatataactagcattggcaaaagtata
atgtgtaaatcttcgcatagaattgaaacaagtgtaaataatgaaattgaaaaagaaaag
gaattggacatatctaagtatgtctatttaagcgaacatttacaaatacgaaaagataaa
cagatttctatgagctcatcattaaataaatatataaatgataatataaattttattaga
cattttactgaaagtaataaatcgttggaagtttcaaaaaaggatgtatcaaaacaattt
gtggatataggggtaaaaatacgatttttactttatagagataaaattaaaaaatataaa
aaatacaaaaaaaagtatgaagaaaaaaatgcaatgaaattaaaaaggttaggaaataat
gtaaacgagttatatgaaaaagttatcacatctaaacaagatactatatcaaaccaaggt
gtttcaacccattgtgggaacgaatctaactgttcagatagtagctgtctactatccgat
tcatcaatcgaaaatggaaacaaagttccaaagaatgtagaaggtcaagatcatcgaatt
ataaagcatttcaattataaggaaagtgatttacatactattaaaaggttggaaaaaaat
aaaaataaatattttgaatatctagatagtatgtatataaaatatggaatgcttaacaat
atgaatatttcttattttcaaaacatccaaaatattattaataaaaatgtttcagatatt
aatataacagataaagtagacaacgaaatgaaaaacattaaacaatttttttcaaatcaa
aaaactattaaaaatattgaaaaaaatcaaaatatgctaaggaccgatattttaaatgca
atgtttggatttaatataattagtgatacccaatgtatgaaacttccaataaaatatata
aatcgtgattatgaatataaacataaagaaggttcagtcaaaaatgatggtctatatgac
cacgacttaatctcaaaaagtgttgacaatgaacgaaacccgtttttgccaaagcttaga
aatgtaaaggaagggaaaaaaggaaaagaggttactacaaaaagtagaaacaataaggtt
gtgaaaaaagctgaaaatattattgacaaaaatacgaaagagaaaatatgtgaatatata
tatgggttgcaaaaaaaaaattgtaaaatgaatgggaaaataaaaagtttaaaacaatat
gtattattaaataattggaaagactttaaaaatcacaatatatatataaatatgatagat
cgtcaaaaaaaagaaaatgaaaagttatttgcaactttatgttatgatcaaatgaattat
ataaaagaaaaaaaacaaatcattttagaaaaggaagaaaaagaacgattaaaattgtta
agagaaaataatatggatgaatatattaaattaattaaaaatgtaaaaaataaaagaata
caagaattgttagatgtaacagataaatttcttaatactatgtctcactctgtattgcat
caaaaaggggaagcagcttctactctttctactgcatctaaagagaatactaatgctaga
gaaaagtattatgatattgcccacactattaaagagaaaattacaaaacagccatccata
ttagttggtggaaatttaatgaagtatcaattagagggtcttgaatggctagtctcttta
cataataacaatctgaatggaattttggcggatgagatggggttaggaaaaacagtgcag
acgataagtttgtttgcttatctgaaagagttagaagggggtgaagcctctagccaattt
aaaatgcataacgaggttggaaaaaacttgatcatcgtcccgttgtccactctgccaaac
tggtcaaacgaatttgaaaaatggtgtccatctttaaatgttataatctataaagggaat
aaaaacgaaagaaaagatattagtaaagtgttgctagaagaaaactatgatatttgttta
actacatttgatattataattcgagaaaaaaatatactaggaaaaatatcttggagttat
ataataatagatgaaggacatagaatgaaaaatgataaatcaaaacttcattctattctt
tcattgtttattagtaaacatcgtatattattaactggtacacctttacaaaataatatg
actgaactatgggctctcttaaattttatacttccaaaaatcttttcttcgtcatcaaat
tttgaagaatggttttcactcccattatgtaatgaaaaaaatgtttatgaatctatgact
gaggaagaagaattacttattattaatcggttgcatactatactcttaccttttatgctt
agacgtttgaaaaaggatgtacttgaatttttgccaaaaaaatatgaatataatatatat
gtacaattatcgttatatcaaaaattgttatacaaacagattgaagaaaaaacttttaaa
caggttaattctgatggtacagtaaatacaaaatcatttcaaaatacaattatgcaatta
cgtaaaattgttaatcatccatttctatttacaaataattatgatattaatgattgtata
ataaaatcaagtggtaagtttgaagtgcttgatagaatgataccaaaattaataaaattt
aaacataaaatattattgttttgtcaaatgacaagagtaatggatatcctttgtgattat
tttgaacttcgaagatataaatatcatagacttgatggtagtgtcagcttatcagatcgt
agacaaattatcgacaattttaatgaacctaagtctgtgaataattgtaaagaaattgat
caaaatgatatcaatgatttatcaaatcaagaattagatactgatgaagctatgatattt
atactttctacaagatctggaggtttagggctaaatttacaagcagcagatactgtaatt
atatttgatagtgattttaatcctcaccaagatattcaagcaatgtgtcgatgccacaga
ataggacaaaaaaatgttgtgaaagtttttcgatttatcacactttcaagtgtagaggag
ttagtctttcaaagggcaaaagataaactcaatataaatgataaagttatacaagcagga
ttatttaataaaatatataatgacaatgatagacaaacaaaattaaaaaatattattaaa
aaaaatcaaaaatatgatactactcttcaaccaacgaatcctatcatgctcaatgaatat
atgagtagaactccagaggaactcgaatattttcttaactttgatcgaaactattttggt
gaagacctgttcgtactcttgcagtctatgcgtcagagggagacacaaaagtcccagttc
cgctacgtcagcgaagacgaggaagaaggagaggaaaaggaagaagaaactgctgccaac
gttgatgctggtgatgccgctaatgctgacaatgctgacgacgctgaccagattgagcaa
attttgataaaatcgaacaagctagtcaacgaggcggagttaccagttcatctattttgt
gaagacattgttgaaaaacctgaaataaattttaagagaacacgaaaagtaattaattat
aatcttatgtatgaagaagagttaactgaagatcagttctgtgaattgatcgatccagat
tcccctcagccattatctcaaaataatgtcaatgaccctattgaaattcaagattgcata
gaaaacgaacaaacgagtgatgtcgtacttttagaaaaccaaacggacgatgccgtactt
ttagataataatcagaaagaggaacaaaataggaaaggtgaaatgaccgatatagaaact
atttatcttgaagaggatcaaagaaaagatgaatatgagttggacaatcaggataagcaa
acggatgtggaaagagaagaaaatggtattaagaaacgaaagggagatgaaaatagtgtc
aacaattttgaaaaaaaatattcagaattttctgaaatgtttgatatgttaaatgtttca
acaaaattacaagaagatgaaaaagaaaacagagaaaacaaaaaacgaaaaaaaattagt
ggacatgaaatgtag

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