Plasmodium chabaudi: PCHAS_0316800
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Entry
PCHAS_0316800 CDS
T01108
Name
(RefSeq) replication factor C subunit 2, putative
KO
K10755
replication factor C subunit 2/4
Organism
pcb
Plasmodium chabaudi
Pathway
pcb03030
DNA replication
pcb03410
Base excision repair
pcb03420
Nucleotide excision repair
pcb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pcb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PCHAS_0316800
03410 Base excision repair
PCHAS_0316800
03420 Nucleotide excision repair
PCHAS_0316800
03430 Mismatch repair
PCHAS_0316800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcb03032
]
PCHAS_0316800
03036 Chromosome and associated proteins [BR:
pcb03036
]
PCHAS_0316800
03400 DNA repair and recombination proteins [BR:
pcb03400
]
PCHAS_0316800
DNA replication proteins [BR:
pcb03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
PCHAS_0316800
DNA Replication Termination Factors
ELG1-RFC complex
PCHAS_0316800
Chromosome and associated proteins [BR:
pcb03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
PCHAS_0316800
DNA repair and recombination proteins [BR:
pcb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
PCHAS_0316800
Check point factors
HRAD17(Rad24)-RFC complex
PCHAS_0316800
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_lid_RFC1
AAA_30
AAA_19
AAA_22
RuvB_N
SLFN-g3_helicase
AAA_23
nSTAND3
DEAD
AAA_11
AAA_assoc_2
nSTAND_NTPase5
AAA_14
AAA_28
ResIII
AAA_16
RNA_helicase
FtsK_SpoIIIE
AAA_5
AAA_7
HP_1247_M
KTI12
bpMoxR
AAA_2
PIF1
Mg_chelatase
DNAX_ATPase_lid
ATPase_2
Viral_helicase1
RsgA_GTPase
UPF0147
ABC_tran
DUF815
nSTAND6
SNF2-rel_dom
TIP49_C
AAA_18
NPHP3_N
TniB
Motif
Other DBs
NCBI-GeneID:
3497903
NCBI-ProteinID:
XP_744784
UniProt:
A0A077TKX8
LinkDB
All DBs
Position
3:<579454..>580446
Genome browser
AA seq
330 aa
AA seq
DB search
MSNLPWVEKYRPKKLDDIVHQTNAISMLKEVIKTKNMPHLIFHGPPGTGKTSAINALAHE
LFGKENISERVLELNASDDRGITVVREKIKAYTRISISKNKINNETNEPLPPWKLVVLDE
ADMMTEDAQSALRRIIEIYSNVTRFILICNYIHKISDPIYSRCSCYRFQGIPLNIKKEKL
LYICNNENINISDDALTKIIETTQGDLRRAVSVLQLCSCIDSKITVESVLDISGLPDNDI
ILKIVDSCKVKDFKILEKTIQDIIEDGFDVSYIFKALNEYFVMCQDINDSIKYQILMELS
RHDFRLHNGATKYIQLMSFASSVHSLLNQA
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacttgccatgggtagaaaagtatagacccaaaaaattagatgacatagttcat
caaacaaatgcaatatcaatgttaaaggaagtaataaaaacaaaaaatatgccgcactta
atatttcatggtcctccagggacaggaaaaacatcagcaataaatgctttagcacatgaa
ctttttggaaaagaaaatattagtgagcgtgtgttagaattaaatgcatccgatgatcga
ggtattactgtagttcgtgaaaaaataaaagcatatacaagaataagtataagtaaaaat
aaaataaataatgaaacgaatgaaccattaccaccatggaaattagttgttttagatgaa
gcagatatgatgacagaggatgctcaatcagctttaagacgaataatagaaatatattca
aatgttacaagatttatattaatatgtaattatattcataaaatatcagaccctatttat
agtaggtgttcatgttatagatttcaaggaatacctctaaatataaaaaaagaaaaatta
ttatacatatgcaataatgaaaatattaatatttccgatgatgcattaactaaaataatt
gaaacaactcaaggagatttgagaagagctgtttctgttttacaattatgttcatgtatt
gattcaaagattacagtagaatctgttttagatatatcgggtctacctgataatgatatt
atattaaaaattgtagattcatgtaaagtaaaagattttaagattttagaaaaaacaatt
caagacataattgaagatggttttgatgtatcttatatttttaaagcattgaatgaatat
tttgttatgtgtcaagacattaatgattcgatcaaatatcaaatattaatggaattatct
cgacacgattttcgtttacataacggtgctacaaagtatatccaactcatgagttttgct
tcctctgtgcactcactactgaaccaagcatag
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