Plasmodium chabaudi: PCHAS_0318100
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Entry
PCHAS_0318100 CDS
T01108
Name
(RefSeq) replication factor C subunit 1, putative
KO
K10754
replication factor C subunit 1
Organism
pcb
Plasmodium chabaudi
Pathway
pcb03030
DNA replication
pcb03410
Base excision repair
pcb03420
Nucleotide excision repair
pcb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pcb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PCHAS_0318100
03410 Base excision repair
PCHAS_0318100
03420 Nucleotide excision repair
PCHAS_0318100
03430 Mismatch repair
PCHAS_0318100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcb03032
]
PCHAS_0318100
03400 DNA repair and recombination proteins [BR:
pcb03400
]
PCHAS_0318100
DNA replication proteins [BR:
pcb03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
PCHAS_0318100
DNA repair and recombination proteins [BR:
pcb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
PCHAS_0318100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
AAA_assoc_2
AAA_30
RCF1-5-like_lid
AAA_14
RuvB_N
DNAX_ATPase_lid
AAA_22
nSTAND3
PTCB-BRCT
AAA_6
Sigma54_activ_2
BRCT_2
AAA_16
AAA_19
AAA_18
Motif
Other DBs
NCBI-GeneID:
3491642
NCBI-ProteinID:
XP_738598
UniProt:
A0A4V0K405
LinkDB
All DBs
Position
3:complement(612458..615076)
Genome browser
AA seq
872 aa
AA seq
DB search
MSSKEKNLFSDNSSDEGRKKKRLKKVSDNLFDDDDDNDMMNNSDAKSVVEIKDDSDEEQE
KGSSTTKSTTNKSFEKNTSKKPAYYDISSYFKPVPKNTGKTQTSNNSSTSTNNTRNNEGK
KIPLENVDDYFKIIETGSKNVSTNPKRERSHDSDLLEQNRFKKKHASIEDCILLPKNEND
VSQNFDYLPFINKKFVLTGVFKSFTRDELQSKIKEHGGSVMSAVSSKTHYLIHGEYLEDG
RLYSEGKKYQKAYELSKQPKTIIKILNEEELLELLPKEKNDNSQSQHNNIETNNIPNKNI
KDEKEYSNFANTNHNQNGSPILNQLWVDKYKPTKIEDLVGNTQNVFKLQSWLSSWDDVCI
KGLKKQVTKTFRGTFENVNARCALLSGPAGIGKTTTAKIVSQSSGYNVIEFNASDERNKA
AVEKIGEMATGGYSITSLNNKSLKKTCIIMDEVDGMSSGDKGGSSAILKLIEKTKCPIIC
ICNDRQNSKMRTLANKCYDLKFTTPNKNSVVKRLLEICKKENLMMEPNALELLWESSNGD
IRQILNALQLLSRTYKRIQFLDIKKDINNSNKNVQSLANPFEITLKLLNFHESSKLKIRE
IMDLFFVDYELIPYFISENYTNIFNDNDKSPNSMNKWNTFAQISYDLSLAERIKYNLKTT
MDYSLLPHFSILSCVCPVMRIRALKSFMQGRINFPSAFGKISTFNKNKRLLNELCFNLSY
KLNVYPKYMITSGFLNYIYYKIVVPLQKNNINESVQLMEEYNITKEMVIENIPSLRLPTQ
ENLYDKLDSKVKAAFTRQYNATHVVKNDPNAVKKSLKSIDKKSAYKNNEDELDEDIDDLS
DSKEDKDDDALVKTKLDKKNKSTTKPKASKKK
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaaaagaaaaaaatttatttagcgacaatagtagtgatgaggggaggaaaaaa
aaacgtttgaaaaaagtttcagataatttatttgacgacgatgatgataatgatatgatg
aataattccgatgcaaaaagtgttgttgagattaaagatgacagtgatgaagaacaagaa
aaaggaagttctactactaaaagtacaactaacaaatcctttgaaaaaaatacatcaaaa
aaacctgcatattatgatatatcctcatattttaaaccagttccaaaaaatacaggaaaa
acacaaacttcaaataattcaagcaccagtaccaacaatacacgaaataacgaaggaaag
aaaataccccttgaaaatgttgatgactattttaaaataatcgaaacaggatcaaaaaat
gtatcaacaaatccaaaaagagaaagaagtcatgattcagatctattagaacaaaataga
ttcaaaaaaaaacatgcatccatcgaagattgtattcttttacccaaaaatgaaaatgat
gtctctcaaaattttgactatttaccttttataaataaaaaatttgttcttacaggtgtt
ttcaaatcttttactagagatgagctacaaagtaaaattaaagaacatggaggtagtgtc
atgtctgctgtctcttcaaaaacacactatcttatacatggtgaatatttagaagatgga
cgattatacagtgaaggtaaaaagtatcaaaaagcttatgaactttctaaacaacctaaa
actataattaaaatattaaatgaagaagagttactagaacttcttccaaaagaaaaaaat
gataactcacaaagtcaacataataatatcgaaactaataacataccaaataaaaatatt
aaagatgagaaagaatactcgaactttgctaacacaaatcataaccaaaatggatcacca
attttaaatcaattatgggtagataaatataagcctactaaaattgaagacttagtaggg
aatactcaaaatgtttttaaattacaatcatggttatcaagttgggatgatgtatgtatt
aagggattaaaaaaacaagttactaaaacttttagaggaacctttgaaaatgtaaatgca
agatgtgcattattaagtggtcctgctggaataggaaaaacaactactgcaaaaatcgtt
tcacaaagttcaggatataatgttatagaattcaatgcatctgatgaaagaaataaagca
gctgttgaaaagattggagaaatggctacaggaggatactctattacttcattaaataat
aaaagcttgaaaaaaacttgtattattatggatgaggttgatggaatgtctagtggtgat
aaaggtggtagttccgctatattaaaattaatagaaaaaaccaaatgcccaatcatatgt
atatgtaatgatagacaaaatagtaaaatgagaacactagctaataaatgctatgattta
aaatttacaacaccaaataaaaatagtgtagttaaaagattattagaaatctgtaaaaaa
gaaaatcttatgatggaaccaaatgctttagaattattatgggaaagctcaaatggggac
ataagacaaatacttaatgctttacaattattatctagaacatataaaagaatacaattt
ttagatataaaaaaagatattaacaattcaaataaaaatgtacaatcattagcaaaccct
ttcgaaataacactcaaattattaaattttcatgaatcatcaaaattaaaaataagagaa
attatggatctattttttgtagattatgaattgataccatattttataagtgaaaattat
acaaatatttttaacgataatgataaatcacctaattctatgaataaatggaataccttt
gcacaaatatcatatgatttatctttagcagaaagaattaaatataatttaaaaacaact
atggattattcattgttgccccacttttcaatcttatcttgtgtatgccctgttatgaga
ataagggctttaaaatcatttatgcaaggtagaataaatttcccatctgcttttggaaaa
atatcaacatttaataaaaataaaagattattaaatgaattatgttttaatttatcttac
aaacttaatgtttatccaaaatatatgataactagtggattcctaaattatatatattat
aaaattgttgtaccactacaaaaaaataatataaacgagtctgtacaattgatggaagaa
tataatattacaaaagaaatggtaattgaaaatataccatctttaagattaccaacacaa
gaaaatttatatgataaattagattccaaagtcaaagcagcttttactcgacaatataat
gcaactcatgttgttaaaaacgatcccaatgctgttaaaaaaagtcttaaatcgattgat
aaaaaatcagcttataaaaataatgaagatgaactagatgaagatatagacgatttaagt
gactcgaaagaagacaaagatgatgatgctttagttaaaactaaacttgataaaaaaaat
aaatcaactacaaaaccaaaagcttccaaaaaaaaataa
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