Plasmodium chabaudi: PCHAS_0416400
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Entry
PCHAS_0416400 CDS
T01108
Name
(RefSeq) coatomer subunit beta, putative
KO
K17302
coatomer subunit beta'
Organism
pcb
Plasmodium chabaudi
Brite
KEGG Orthology (KO) [BR:
pcb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcb04131
]
PCHAS_0416400
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcb04147
]
PCHAS_0416400
Membrane trafficking [BR:
pcb04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
PCHAS_0416400
Exosome [BR:
pcb04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
PCHAS_0416400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_Nup120_160
WDR90_beta-prop_4th
TPR_GEMI5
WDR54
Motif
Other DBs
NCBI-GeneID:
3488901
NCBI-ProteinID:
XP_735902
UniProt:
A0A4V0K5A5
LinkDB
All DBs
Position
4:584651..587599
Genome browser
AA seq
982 aa
AA seq
DB search
MPLNLDIKKKLNSRIGKVKCVDIHESEPWILAALYNGKLIIFDYSNQNTIKNIEVSGYPL
RCAKFIEKKQWIICTGDDMTIRVYNYNTFEKIISFEGHSDYIRYIEVHQTLPYILTCSDD
MTIKLYDYENNFEKLCSFENHIHYVMMCKFNPKDTYIFASASLDKTIKIWGVQNNMPVVT
KPHFTLTGHTKGVNCIDYSSSGETSYIISGSDDKTIRVWDYHTKQCIQVLSGHTQNVSCL
IYHSNLPIIISSSEDCNVKIWNSSMYKLESTLNYNMDKCWSICAKKTKNDLCIGYDEGLV
VIQMGSDKPIYTMFKNKIIYIKNADIFIINLQNINNDDNYNDGDIYKVNKKELGNCDFYP
TNASFHPSGRFVCVSGHHEFNIYTSQVLRNKAYGKSPFFVWANNGDYAIKDEGNKIVIYK
DFTVCHSFQTPYPITELFGGYLLGVKSNNFICFYDWNYYNMVRKIDINVKNVYWNEAGTY
IAISTEESVYILSYNKNDEGSSKDMKGIQTSMNSVEGNNNMDENNFELESEITESIESGI
WIYDSFLYVSKNLRLYIYTKKFNDIYVYIDKYLYICGYVYEFDRIFLLDKNYNFYSFYIP
IVYLQYQKYIINKDFESADNLLSSIPESLHNKLSLFLEKMGYKNKALTICTDMEKKFELA
LSIGNLQLCIEIIKNIESKEDKATIQNKYKVLGDTALVYNDIPMAIHCYKKTNDCSSLLI
ILSTLGDKMGIEELGQMCLKSKKYNIAFICYFLLHKISKCVEILLTSNNYAYAAYFARVY
KPSLLPDILLKWKECLNKTYQTPPISLLTPDENPEYFPNYELAIKCESIFEKTKTLGTTQ
NYTTLKNLIDINIIDEINEIGYEKVEDIFVKQFNDELEKDVKNLDMISSLSSVQKKETEI
KSIDQSQDQNISENKMDNNSSNLKREPFSDENNDVPFSSSQEIHQNSGDNLENLNNIDEN
ISFEMPGESFDSMNDKADKELE
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgcctcttaatttagatataaagaaaaaattaaactctcgaattggtaaggtaaaatgc
gttgatatacatgagagcgagccatggatccttgcggctctgtataatgggaagctaatt
atatttgactactccaaccagaatacgataaaaaatatagaggtttctgggtacccatta
cgttgtgcaaaatttatagaaaaaaaacaatggataatatgtacaggagatgatatgaca
ataagggtttataattataatacatttgagaagatcatatcatttgaaggacatagtgat
tatataagatatattgaagttcatcaaacgttaccatatatattaacatgttccgatgat
atgacaataaaattatatgactatgaaaataactttgagaaattatgctcctttgaaaat
catattcattatgtaatgatgtgtaaatttaatcctaaagatacttatatttttgcatcc
gcttctttagataaaactataaaaatatggggtgtacagaataatatgccagtcgttact
aaacctcattttaccttaacaggtcatacaaaaggtgtaaattgtattgactattcatcg
agcggtgaaacatcatacattatcagtggtagtgatgataaaacaatacgtgtatgggat
tatcacacaaaacaatgtatacaagtattaagtgggcatacacaaaatgtatcatgttta
atttatcatagtaacttgcctataattatttcttcgtctgaagattgtaatgtaaaaata
tggaatagttctatgtataaattagagagtacattaaattataatatggataaatgttgg
tctatatgtgcaaagaaaacaaaaaatgatttatgtataggatatgatgaagggttagtg
gttattcaaatgggatcagataaacctatatatacaatgtttaaaaataaaataatttat
ataaaaaatgctgatatatttattataaatttacaaaatataaataatgatgataattat
aatgatggtgatatatataaagtaaataaaaaggaattaggaaattgcgacttctatcca
actaatgcttcgtttcatcctagcggaagatttgtatgtgttagtggtcatcatgaattt
aatatatatacatctcaggtgttaagaaataaggcatatggaaaaagccctttttttgta
tgggcaaacaatggggattatgctataaaggatgaagggaataaaattgttatttacaaa
gattttactgtatgtcattcttttcaaactccttatccaattactgagctatttggagga
tacttattaggagttaaatcgaataattttatttgtttttacgattggaattattataat
atggtgagaaagatcgatattaatgtaaagaatgtatattggaatgaggcaggaacctat
atagcaatatctaccgaagaaagtgtgtacatacttagttataacaaaaacgatgaagga
tctagtaaagatatgaaaggtatacaaacaagtatgaatagtgttgaaggaaataataat
atggatgaaaacaattttgaacttgaaagtgaaataactgaatctatagaaagtggaata
tggatatatgatagttttttatatgtttcaaaaaatttaagattatatatatatacaaaa
aaatttaatgatatatatgtatatatagataaatatttatatatctgtggatatgtatat
gaatttgatagaatatttttattagataaaaattataatttttatagtttttatatacca
atagtatatttacaatatcaaaaatatataataaataaggattttgaatctgctgataat
ttattaagttctattccggagtctttacataataagttaagtttattcttagagaagatg
ggatataaaaataaggctttaacaatatgtacagatatggaaaaaaaatttgagttagcc
ttatcaattggaaatttacagctatgtatagaaattataaaaaatatagaaagtaaagaa
gataaagcaacaattcaaaataaatataaagtattaggagatacagcactagtatataat
gatataccaatggcaatacattgttataaaaaaacaaatgattgttcctctttattaatt
atattatcaacattaggagacaagatgggtattgaagagttgggacaaatgtgtttaaaa
agtaaaaaatataatatagcatttatatgttattttttattacataaaataagtaaatgc
gttgaaatattattaacaagtaataactatgcatatgctgcatattttgcaagagtatat
aaaccatctttattacccgacatattattaaaatggaaagaatgtttaaataaaacatat
caaacacctcctatttcattattaacacctgatgaaaatcctgaatattttcctaattat
gaactagctataaaatgtgaatccatttttgaaaaaacaaaaacccttggtactacacaa
aattatacaacattaaaaaatttgattgatataaatattatagatgaaataaatgaaatt
ggttatgaaaaagtcgaagatatctttgtcaaacaatttaatgatgaacttgaaaaggat
gtaaaaaatttggatatgatcagttcattgagttcggttcagaaaaaagaaacagaaata
aaatcgatcgatcaaagtcaagatcagaacatttcagaaaacaaaatggataacaattct
tctaatttaaaacgagaaccatttagcgacgaaaataatgatgtgccattttcaagttca
caagaaatacatcaaaatagcggtgataatttagaaaatttaaataatatcgatgaaaat
atcagctttgaaatgccaggtgaatcgttcgattcgatgaatgataaagcggataaagaa
ttggaataa
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