Plasmodium chabaudi: PCHAS_0501400
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Entry
PCHAS_0501400 CDS
T01108
Name
(RefSeq) DNA polymerase delta catalytic subunit, putative
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
pcb
Plasmodium chabaudi
Pathway
pcb03030
DNA replication
pcb03410
Base excision repair
pcb03420
Nucleotide excision repair
pcb03430
Mismatch repair
pcb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PCHAS_0501400
03410 Base excision repair
PCHAS_0501400
03420 Nucleotide excision repair
PCHAS_0501400
03430 Mismatch repair
PCHAS_0501400
03440 Homologous recombination
PCHAS_0501400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcb03032
]
PCHAS_0501400
03400 DNA repair and recombination proteins [BR:
pcb03400
]
PCHAS_0501400
Enzymes [BR:
pcb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PCHAS_0501400
DNA replication proteins [BR:
pcb03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
PCHAS_0501400
DNA repair and recombination proteins [BR:
pcb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
PCHAS_0501400
MMR (mismatch excision repair)
DNA polymerase delta complex
PCHAS_0501400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
E2-Crich
Motif
Other DBs
NCBI-GeneID:
3494797
NCBI-ProteinID:
XP_741713
UniProt:
A0A4V0K3A6
LinkDB
All DBs
Position
5:61879..65172
Genome browser
AA seq
1097 aa
AA seq
DB search
MEQNIFSATNVIPYGPLYDKVKKVKNNDQDENYPVVEEYEKLLKIYERPNPYDSNGCLKF
NNNDDLILFQIDLDYTVENIFRNVIYSNEGSTNNSDSKCDSIYEPYKAILGKEKNFVSVP
IIRIYSITNCGYSVLVNVHNFFPYFYVEKPNGFNNDDMIKLESMLNENLSLNNQFKMYEN
KILKIETVKTESIMYFKKSGKTDFLKITVLLPKMVPSLKKYFENGITVNSKHFGGIVYEA
NLPFILRYIIDKKITGSSWIKCEKNSYIIRSKNKQSSNCTFEIDIHYENIEPMPLENEYQ
KIPKLRILSFDIECIKLDGKGFPEAKADPIIQISSILYLQGDPIENCAKFIFTLLECASI
PGSNVIWFNDEKTMLEAWNEFIIRIDPDFLTGYNIINFDIPYILNRGTALNLKKLKYIGR
IKNVPSIVKDANFSSKQFGTHETKEININGRIQFDVYDLIKRDYRLKSYTLNYVSFEFLK
EQKEDVHYSIMNDLQNENSESRKRIATYCIKDGLLPLRLIDKLLFIYNYVEMARVTGTPF
VYLLTRGQQIKVTSQLYRKCKELNYIIPSTYMKVNSNDKFEGATVLEPIKGYYIEPISTL
DFASLYPSIMIAHNLCYSTLIKNNDEISDLNKNDITTVPGKNNFKFVKGNVKRGVLPLIV
EELIKARKNVKAMMKNEQNPITKMVLNGRQLALKISANSVYGYTGAAAGGQLPCLEIATS
ITTFGRSMIEKTKETVEAYYCKKNGFEHNATVVYGDTDSVMVKFGTNDVGEAMRLGKDAA
DRISKEFLNPIKLEFEKVYCPYLLLNKKRYAGLLYTNPNKHDKMDCKGIETVRRDFCILI
QQMMETVLNKLLIEKDLNSAIEYTKSKIKDLLTNNIDMSLLVVTKSLGKTEYETRLPHVE
LAKKLKQRDSATAPNVGDRVSYIIIKGTKGQAQYERAEDPLYVLDNNLSIDHNHYLDAIK
NPLSRIFEVIMQNSDSLFCGEHTRHKTILTSSQTALSKFLQKTIRCIGCNSSIKKPPLCN
HCKTNKEFSIYMQKIKDLKVKQNEFFQLWTECQRCQGNLHIDVICMNRDCPIFYRRAKIK
KDVANLQEQVTSLKTEW
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atggaacaaaacatattttcggccacaaatgtaattccttatggtcctctttacgataaa
gtaaaaaaggtgaaaaataatgaccaagatgaaaattatcctgttgtagaagaatacgaa
aagttgctaaaaatatatgagagaccaaatccgtatgattcaaatggctgtttaaaattc
aacaacaatgatgatttgatattatttcagatcgacttagattacactgtggaaaatata
tttcgaaacgtgatttatagtaatgaaggctctacaaataatagcgattctaaatgtgat
agtatctatgagccatataaagcaatcctaggcaaagaaaaaaatttcgtatctgttcca
attattcgaatatacagcatcacaaattgcggatatagtgttttagtgaatgttcacaac
tttttcccatatttttatgtagagaaaccaaacggttttaataatgatgatatgataaaa
cttgaatctatgctaaatgaaaatctgagtctaaataatcaatttaagatgtatgaaaat
aaaatattaaaaatcgaaactgttaaaacagaaagtattatgtattttaaaaaatcagga
aaaacggattttttaaaaataaccgtcttattacctaagatggttccatcattaaaaaaa
tattttgaaaatggtataactgttaacagtaagcattttggtggtatcgtatatgaagcc
aatttaccatttattttaagatatattattgataaaaaaataactggttcatcatggatt
aaatgtgaaaagaatagttatattatacgaagtaaaaacaaacaatcgtctaattgcaca
tttgaaattgatatacattatgaaaatatagaacctatgccgttagaaaatgaatatcaa
aaaattcccaaattaagaatcctttcctttgatattgaatgtataaaattagatggaaaa
ggttttccagaagcaaaagcagatcctattatacaaatatcgtcaattttatatttgcaa
ggtgatccaattgaaaattgtgcaaaatttatttttacacttttagaatgcgctagtata
cctggttcaaatgttatatggtttaatgatgaaaaaacaatgctagaagcatggaatgaa
tttattataagaatagacccagattttttaacaggttataatatcataaattttgatata
ccatatatattaaacagaggtaccgctttaaacttaaaaaaattaaaatatataggtaga
ataaaaaatgttccaagtatcgttaaagatgccaatttttcttcaaaacaatttgggaca
catgaaacaaaagaaattaatattaatggaagaatacaattcgatgtttacgatctaatt
aaaagagattatagattaaaatcgtatacattaaactatgtgtcatttgaattcttaaaa
gaacaaaaagaagatgtgcattatagcataatgaacgatttacaaaatgaaaattcggaa
tcgcgtaaacgtatagccacttattgtattaaggatggtttgttacccttacgattaatt
gataaattattatttatttataattatgtagaaatggctagagttactggtacaccattt
gtttatctattaactagagggcagcaaattaaagttacttcacaattatatagaaaatgt
aaagaattaaattatattatccctagcacatatatgaaagttaatagtaatgataaattt
gaaggtgctactgttttggagccaataaaaggttattatatagaacctatttcgactctc
gattttgcatctttatatccatctattatgatcgcccataatttatgttattctaccctc
ataaaaaataatgatgaaatttctgacctaaataaaaacgatataacaacggtaccagga
aaaaataattttaaatttgttaaaggtaatgtaaaacggggtgtattgccattaattgtc
gaagaattaataaaagccagaaaaaacgtaaaagctatgatgaaaaatgaacaaaatcca
attacaaaaatggtgcttaacggcagacaattagcacttaaaatatcagcaaattctgtt
tatggatatactggtgcagcggctgggggtcagttgccttgtttagaaatagctacctca
attactacattcggtagatctatgatagaaaaaacaaaagaaacagttgaagcatattat
tgtaaaaaaaatgggtttgagcacaatgcaactgttgtatatggtgatacagattctgta
atggttaaatttggcacaaatgatgttggagaagcaatgagattaggtaaagatgcagca
gacagaataagtaaagaatttttaaatcctattaaattagaattcgaaaaagtatattgc
ccatatttattacttaataaaaagagatatgcaggcttattatacactaatccaaataaa
catgataaaatggattgtaaaggtattgaaacagttagaagagatttttgcatacttata
caacaaatgatggaaacggttttaaataaattattaatagaaaaagatttaaatagcgct
atcgagtatacaaaaagtaaaattaaagatttattaacaaataatatagatatgagttta
ttagttgtaactaaatcattaggaaaaactgaatatgaaactagattgccacatgttgaa
ttggcaaaaaaattgaaacaacgagatagtgccacagcccccaatgttggggatagagtt
agttatatcattataaaaggtacaaaaggacaagcacaatatgaaagagctgaagatcca
ttatatgtattagataataatttatcaatagatcataatcattatctagatgctatcaaa
aatccactatctagaatatttgaagttattatgcaaaattcagactctttgttttgtgga
gaacatacaaggcataaaactatcctaacatcaagtcaaacagctttatcgaaatttctt
caaaaaactattagatgcataggttgtaatagctcaattaaaaaaccaccattatgtaac
cattgtaaaacgaacaaagaattctctatttatatgcaaaaaattaaagatttaaaagtc
aagcaaaacgagttctttcaactatggaccgaatgccaaagatgtcaaggaaatttacac
atagacgtcatttgcatgaatagggattgccccatattttacaggagggcaaaaattaag
aaggatgtagcaaaccttcaagaacaagttacatccctcaaaactgaatggtaa
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integrated database retrieval system
