Plasmodium chabaudi: PCHAS_0504700
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Entry
PCHAS_0504700 CDS
T01108
Name
(RefSeq) rRNA (cytosine-C(5))-methyltransferase, putative
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
pcb
Plasmodium chabaudi
Brite
KEGG Orthology (KO) [BR:
pcb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcb03009
]
PCHAS_0504700
Enzymes [BR:
pcb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
PCHAS_0504700
Ribosome biogenesis [BR:
pcb03009
]
Eukaryotic type
Other ribosome biogenesis factors
PCHAS_0504700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
FtsJ
NSUN5_N
Ribosomal_S8e
DUF4446
Motif
Other DBs
NCBI-GeneID:
3496922
NCBI-ProteinID:
XP_743814
UniProt:
A0A4V6M8Z0
LinkDB
All DBs
Position
5:complement(184744..186257)
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AA seq
469 aa
AA seq
DB search
MSFIYRKAAQMLMKCSKGDGIKDVLFKKEDKSIKKIYFIVHKSMEDLDIFNEIYNSHLSK
ICKNKYLGIVLLCVLIHRKKIDGGGELKREILKKEKEIFQLYNNLKNNNNVKINILTKYF
IIYLNDNPNIVNEIKTLLPIENDEDVENLYKICTSKVKDLIDSIYYKNDKIRILDKSSGL
VVKSANIQKGMTIVDVCSSPGSKAILSLLNLKNKGYLICIEKSKTRCYTLIREILKNNEY
IGYYTNENMNETDKIDIDKRDLFINNENNIYYIKHKNNELIIKIYNCDFLKLTHKDFQEI
GNIDVVFVDPSCSSSGMPDFVHKENMRKVFLQTKQIGNDKNKKNEEDNKYNNYNIYSDIS
EERIPKVPNTLIDKIKNLSTFQKDILNHALITIKTAKTFIYSTCSFFEEENEQVIKNVLE
KNLDFYIENAGTDKFLFKNGKYEFSDKCVRTFPNRDNCRGIFICKMCRK
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttatttataggaaggctgcacaaatgttgatgaagtgctcaaaaggagatgga
ataaaggatgttctgtttaaaaaagaagataaatccataaaaaagatatatttcattgtt
cataaatcgatggaagacttggatatatttaacgaaatttacaactctcatttgtcaaaa
atctgcaaaaacaaatatcttggaattgttttattgtgtgtgttaatacaccgaaaaaaa
attgacggtggaggagaattaaagagagagattttgaaaaaagaaaaagaaatatttcaa
ctttataataatttaaaaaataataataatgttaaaataaatatattaacaaaatatttt
ataatatatttgaatgataatccaaatatagtgaatgaaataaaaacattgctacctata
gaaaatgatgaggatgttgaaaatttatataaaatatgtacaagcaaggtaaaagattta
atagatagtatatattataaaaatgataaaataagaatattagataaatcatctggttta
gttgttaagtcagcgaatatacaaaaaggaatgactattgttgatgtatgttcatcacct
ggaagtaaagcaattcttagcttactcaatttaaaaaacaaaggatatttaatatgtata
gaaaaaagtaaaacacgatgctataccttaattcgagaaattctaaaaaataatgaatat
attggttattatactaatgagaatatgaacgaaacagataaaatagatatcgataaaagg
gatttatttataaataatgaaaataatatatattatattaaacataaaaataatgaatta
attataaaaatatataactgtgattttttaaaattaactcataaagactttcaggaaatc
ggcaatatagatgttgtatttgtagacccttcatgttcgtctagtggaatgcctgatttt
gttcacaaggaaaatatgcgtaaagtatttttacaaactaaacagattggaaatgataaa
aataaaaaaaatgaagaagacaacaaatataataattataatatttattctgacatatca
gaagaaagaattccaaaagttccaaacacacttatagataaaataaaaaatttatcaacc
tttcaaaaagatatattaaatcatgcattgataactataaaaacagccaaaacatttatt
tattctacttgttctttttttgaagaagaaaatgaacaagtcataaaaaatgtgctcgaa
aaaaatttagatttttatatagaaaatgctggaacagataaatttctttttaaaaatggg
aaatatgaattttctgataaatgcgtcagaacatttcctaaccgagacaactgtcgtggc
atattcatttgcaaaatgtgcagaaaataa
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