Plasmodium chabaudi: PCHAS_0506700
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Entry
PCHAS_0506700 CDS
T01108
Name
(RefSeq) serine/arginine-rich splicing factor 4, putative
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
pcb
Plasmodium chabaudi
Pathway
pcb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PCHAS_0506700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcb03041
]
PCHAS_0506700
Spliceosome [BR:
pcb03041
]
Common components
Common spliceosomal components
SR proteins
PCHAS_0506700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_7
Nup35_RRM_2
DUF4926
Motif
Other DBs
NCBI-GeneID:
3495620
NCBI-ProteinID:
XP_742529
UniProt:
A0A077XB08
LinkDB
All DBs
Position
5:complement(285055..287010)
Genome browser
AA seq
476 aa
AA seq
DB search
MGYRSSRYRTSCIYVGNLPGNVLEDEVYDLFGKYGRIKYIDIKLTRGSSSTAYAFVHYYD
IKDAEYAIERRDGYKFDGERLRVEFSGENKSFGKYRRKEDGIGPPLRTEHRIIVSNLPDN
CKWQHLKDIMRQCGDVGYANIEHGKGIVEFVDRDGMLYAIEKFDRAEFKVHDQVTNIKVR
RDKRSLSYIKKHRSDYYSPRHKKKRIYSDESESNRSRRRSKYSSSSSKGHSKSGTDSDSS
YDKKERKKDRNKNKRSYSSDGKGDDKYSRSESSNSLSDDRTYKKKKKNYSTSSDRSSKGS
RYNSEKRSRESRSHSKSGSEYKSRSISEDISNNEKQSGKNVKRENSLSGEKEEKQDHTES
PKSGYNSTASEVKKDDNEDKNDEVDESKKNEKSSAAPRGRKTAAKRKPKAGKAKKGKNEN
KSENDDLKSVSNDGNKSDTNKSVDKENNNDTSVNQTEETKPKRGRRGRKKANPEEN
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgggttatagatcttcaaggtatagaacatcatgcatatatgttggaaacttaccagga
aatgtcttggaagacgaagtctatgacttatttggaaagtatggacgtataaaatacatt
gatataaaattaacaagaggatcaagctctacagcatatgcatttgttcattattatgac
ataaaagatgcagaatatgcaatagaaagaagagacgggtataaatttgatggggaacgt
ttacgtgttgaattttctggagaaaataaaagctttggaaaatatcgaagaaaagaagat
ggaattggtccacctttaagaacagaacatcgaattattgttagcaatttaccagataat
tgcaaatggcaacatttaaaagacataatgagacaatgtggtgatgttggatatgccaat
attgagcatggtaaaggtatcgtggagtttgttgaccgcgatggaatgctatatgcaatt
gaaaaatttgatcgtgcagaatttaaagttcatgatcaggttacaaatattaaagttaga
agagataaaagaagtttatcttacataaaaaaacatagaagtgattattatagcccacga
cataaaaaaaaacgaatatatagtgacgaatctgaatcaaatagatcacggcgacgcagt
aaatatagtagctcatcaagcaaaggacacagcaaatctgggacagatagtgatagctca
tatgataaaaaggagagaaaaaaagatagaaataaaaacaaaagaagctattcttctgac
gggaaaggagatgataaatatagtagaagtgaatcaagcaattcattaagtgatgataga
acttataaaaagaaaaaaaaaaattacagtacttcaagcgatagatcaagcaaaggatcc
agatataattcagaaaagagaagtagagaaagtaggagtcatagtaaaagtggaagtgaa
tacaaaagtagaagtattagtgaagatataagcaataatgaaaaacaaagcggaaaaaac
gtgaaaagggaaaatagtttaagcggtgaaaaagaagaaaaacaagatcatactgaatct
ccaaagtcaggatataatagcacagcttcggaggtaaagaaagatgataacgaggataaa
aatgatgaagtggatgaatccaaaaaaaatgagaaatcttcagctgccccaagaggaagg
aaaacggctgctaaaaggaagccaaaagctggaaaggcaaaaaaaggaaaaaatgaaaat
aaaagtgaaaatgacgatttaaaaagtgtttccaatgatggcaataaaagtgatacaaat
aaatcagtagataaggaaaataataacgacacctcagttaatcaaactgaagaaacaaaa
cccaaaagaggtagaagaggtagaaagaaagcaaatcctgaagaaaattaa
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