Plasmodium chabaudi: PCHAS_0511600
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Entry
PCHAS_0511600 CDS
T01108
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7, putative
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
pcb
Plasmodium chabaudi
Pathway
pcb03020
RNA polymerase
pcb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pcb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PCHAS_0511600
09124 Replication and repair
03420 Nucleotide excision repair
PCHAS_0511600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcb03021
]
PCHAS_0511600
03019 Messenger RNA biogenesis [BR:
pcb03019
]
PCHAS_0511600
03400 DNA repair and recombination proteins [BR:
pcb03400
]
PCHAS_0511600
Transcription machinery [BR:
pcb03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
PCHAS_0511600
Messenger RNA biogenesis [BR:
pcb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
PCHAS_0511600
DNA repair and recombination proteins [BR:
pcb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
PCHAS_0511600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHS2_Rpb7-N
S1
Motif
Other DBs
NCBI-GeneID:
3490838
NCBI-ProteinID:
XP_737810
UniProt:
A0A077XBE4
LinkDB
All DBs
Position
5:complement(462406..463162)
Genome browser
AA seq
177 aa
AA seq
DB search
MYFVIEEWKNVIIKPSQLGPKYQQYIEDMLRNSIEGQCTEKYGYIICVIRIMHSEPGRVQ
DGTGMIVVKVKYQAIVFKPFKDEVLDAIVTDVNKLGFFAQAGPLKIFISRTAIPKYFEYT
EDAHYPCFSSGSHNIKPQTTVRLKLQGIRYDLSNMFAIATINNEYLGCIESNTLQVM
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atgtattttgtcattgaagagtggaaaaatgtgattataaagcctagccagttagggcct
aaatatcagcagtatattgaggatatgctaagaaatagtattgaaggtcaatgtactgaa
aaatatggatacattatatgtgtgattaggattatgcatagtgaaccgggaagagttcaa
gatggtacaggaatgattgtagttaaagtcaaatatcaagcaatagttttcaaaccattt
aaggatgaggttctcgatgcaatcgttacggacgtaaataaattgggtttttttgcgcaa
gcaggaccattaaaaatatttatatcaagaactgctattcccaaatattttgaatatacg
gaagatgcgcattacccttgtttttcatcaggtagccataatataaagccacaaacaacg
gttcgattaaaattacaaggtatacgatatgatttatcaaatatgtttgcaattgctact
attaataatgaatatcttggatgtatagaatcaaatacattgcaagttatgtag
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