Plasmodium chabaudi: PCHAS_0514100
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Entry
PCHAS_0514100 CDS
T01108
Name
(RefSeq) transcription elongation factor SPT4, putative
KO
K15171
transcription elongation factor SPT4
Organism
pcb
Plasmodium chabaudi
Pathway
pcb03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pcb00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
PCHAS_0514100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcb03021
]
PCHAS_0514100
03019 Messenger RNA biogenesis [BR:
pcb03019
]
PCHAS_0514100
Transcription machinery [BR:
pcb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
PCHAS_0514100
RNA polymerase I system
PCHAS_0514100
Messenger RNA biogenesis [BR:
pcb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
PCHAS_0514100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt4
R-HINP1I
BaffR-Tall_bind
Motif
Other DBs
NCBI-GeneID:
3498281
NCBI-ProteinID:
XP_016655205
UniProt:
A0A077XBA8
LinkDB
All DBs
Position
5:532324..533057
Genome browser
AA seq
131 aa
AA seq
DB search
MATPKGRKKSDMKKIDDPFAEHGDSTKKSRSIAQDDRALKLRACLSCRLLQTEAEFYQSG
CSNCKFLQMTGDRHRIQDCTTENFSGFIAITTPTKSWIAQYNDLSKFNPGFYALQVVGEL
PESIRDLKSNY
NT seq
396 nt
NT seq
+upstream
nt +downstream
nt
atggcaactccaaaaggaaggaaaaaatcagacatgaagaaaattgatgatccattcgca
gagcatggggattcaactaaaaaatcgagaagtattgcccaagatgatagggccttaaaa
ttgcgagcatgtttatcttgccgtttgttgcaaactgaagctgaattttatcaaagcgga
tgtagtaattgtaaatttttgcaaatgacaggggacagacataggatacaagattgtaca
acagaaaattttagtggatttatagcgataactactcctacaaaatcttggatagctcaa
tataatgaccttagcaaatttaatccaggtttttatgccttacaggttgtaggagaatta
cctgaatcaataagagacttaaagtcgaactattaa
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