Plasmodium chabaudi: PCHAS_0718400
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Entry
PCHAS_0718400 CDS
T01108
Name
(RefSeq) ribosomal RNA small subunit methyltransferase NEP1, putative
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
pcb
Plasmodium chabaudi
Pathway
pcb03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pcb00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PCHAS_0718400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcb03009
]
PCHAS_0718400
Enzymes [BR:
pcb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
PCHAS_0718400
Ribosome biogenesis [BR:
pcb03009
]
Eukaryotic type
90S particles
Other 90S particles
PCHAS_0718400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMG1
Motif
Other DBs
NCBI-GeneID:
3497347
NCBI-ProteinID:
XP_744233
UniProt:
A0A077TMT0
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All DBs
Position
7:674864..675559
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AA seq
231 aa
AA seq
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MEPNDDKIIHFSEDNNKTEKKIIIILEGACLQLIEIKPYIYELANNTKHKNILLKGKNED
NIKNYRPDILHQCLIHLLESPLNKYGMLQIYIKTHDNQLFYVSPHLKIPKTYNQFESLMV
TFLRKYKIKANEKNIYLLKIIKNDYNNILPTNGKKIALSLKGEKVNLPDYVQNFKDEQIP
ITFFIGAVAYSNPTMNLDIIDQSISISEYSLSAATCCSSICSEFENLWKLF
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atggaacctaatgacgataagattatacacttttcggaagataataacaaaacagaaaaa
aaaataataataatattagagggtgcctgtttacaattgatcgaaataaaaccatatatc
tatgaactagctaataatacaaaacataaaaatatattattaaagggaaaaaatgaagac
aatataaaaaattatagacctgatattttacatcaatgtttaatacatttattagaaagc
ccattaaataaatatgggatgttacaaatatatataaaaacacatgataaccaattattt
tatgtttcaccccatttaaaaatacctaaaacatataatcaatttgaatcattaatggtc
acttttttaagaaaatataaaattaaagcaaatgaaaaaaatatatatttattaaaaatt
ataaaaaatgattataataatattttaccaactaatggaaaaaaaatagctttatcatta
aaaggcgaaaaagttaatttacctgactatgttcagaattttaaagatgaacaaatacct
ataacattttttataggagctgtagcatattctaacccaactatgaatttagatattatt
gatcaaagcataagtatttcagaatatagtttaagtgctgctacttgttgttcttcgata
tgttctgagtttgaaaatttgtggaaattattctga
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