Plasmodium chabaudi: PCHAS_0718600
Help
Entry
PCHAS_0718600 CDS
T01108
Name
(RefSeq) ATP-dependent RNA helicase DHX36, putative
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
pcb
Plasmodium chabaudi
Pathway
pcb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PCHAS_0718600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcb03019
]
PCHAS_0718600
03012 Translation factors [BR:
pcb03012
]
PCHAS_0718600
Enzymes [BR:
pcb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PCHAS_0718600
Messenger RNA biogenesis [BR:
pcb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
PCHAS_0718600
Translation factors [BR:
pcb03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
PCHAS_0718600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
ResIII
AAA_11
nSTAND3
AAA_14
AAA_22
ABC_tran
NPHP3_N
NB-ARC
TsaE
AAA_19
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
3498197
NCBI-ProteinID:
XP_745075
UniProt:
A0A4V0K7C6
LinkDB
All DBs
Position
7:680656..683328
Genome browser
AA seq
799 aa
AA seq
DB search
MKDLPILRYKNEIKEKLKDNKLIVIKGETGCGKTTQVPQIINEIYFDEKENDDKENIDKD
AAQRILVSLPRRVATISVAERVSKEMGRGNVGEYVGYSIRFKNVCSKKTKIKFVTDGILI
REIMGDPLLKNYKFIILDEIHERSIRTDVLLGYTKILIEKRNDLKIILMSATFDINIFNS
FLGNPPIISIPHKIHKISIFYPKNLIEDYLLSIVCTILQIHFENSYAKKNMNSSEYYEHD
DLKNADQELCDNPNILKNQNIHNTQNYDLVNEGDENYNDIIGDILVFLPGQEEIEMVNIM
LKEKLKIIYKGMLLKKLINDKKNININDDEDIVTKFNYAMGSLHENPVDDISFHFGDTEI
IPDKIYSMKILQLYSSLPNKKQKMIFDPVPPNTRKVILSTNIAETSVTIPNIKYVIDSGK
AKVKFFDEKKGCSVLKITKITKDSAIQRSGRAGREGPGKVYRIYTKDEYDSMKPFLIPEI
FRSDLTQIYLELKAMNIKNPLDFNFPENPKKELFIHSAKMLFKIKAIDVNNNLTELGRQI
SLLPLSPIYGNMLLSAVSFNCVDEMATLIALLNCDSIFLNFNFDDEFDDADTNLATMASK
GNGKNENRNKDKSKKEDEDYDELKINDKHKIINIARKKLIHPDGDHLTILHVFYLWEEEL
TNSGKKQFCNMYGLNNEVLINVQKIKKQLLEILSNKLKIKINKKLHMHNWDNIMMSLCKS
CYFNVAKHISNSSVFMNLVTKTKLRIHPSSTLFNSFTKPSFIFYSDVVQTKRLYARVVTK
VDPEWLIKFVPKNFQIAKD
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgaaggatttaccaatattaagatataaaaatgaaataaaagaaaaattaaaagataat
aaacttattgttataaaaggggaaacaggatgtgggaaaacaacgcaggtaccacaaata
ataaatgaaatatattttgatgaaaaagaaaatgatgataaagaaaacattgataaggat
gcggcccaaagaatcctcgtgtctttgccaagaagagttgctacaatatctgtagcagaa
cgtgtatcgaaggaaatgggtagaggaaatgttggtgagtatgtaggatatagtatacga
tttaaaaatgtttgttcgaagaaaacgaaaataaaattcgtaacagacggaatattaata
agagaaataatgggcgatccattattaaaaaattataaatttattattttagatgaaata
catgaaagatctataagaactgatgtattattaggatatactaaaatattaatagaaaaa
agaaacgatttaaaaattattcttatgtcagctacttttgatataaatatttttaacagc
tttttgggaaatcctccaattatatcaattcctcataaaattcataaaatttcaattttt
tatccaaaaaatttaatagaggattatctactgtctattgtatgtacaattttacaaata
cattttgaaaattcttatgcaaaaaaaaatatgaacagttcagaatattatgaacatgat
gacctaaaaaatgcagatcaggaattatgtgataatccaaatattttgaaaaatcaaaat
atccataacacacaaaattatgatttagtaaacgaaggtgatgaaaattataatgacata
atcggagacattttagtttttttacctggacaagaagaaattgaaatggttaatattatg
cttaaggaaaaactaaaaattatttacaaaggaatgttattaaaaaaattaataaatgat
aaaaaaaatataaatataaatgatgatgaagatattgtaactaaatttaattatgcaatg
ggatcacttcatgaaaatcctgttgatgatatatcattccattttggtgatacagagatt
attcctgataaaatatatagcatgaaaatattacagctatattcttcccttcctaataaa
aaacaaaaaatgatttttgaccccgttccccctaacacgcgaaaggtgatcctcagtacg
aacatcgccgaaacatccgtgacgatccctaacattaagtacgtaatagatagtggtaag
gcaaaggtaaaatttttcgatgaaaaaaaaggatgcagtgttttaaaaattacaaaaata
acaaaagattctgcaattcaacgaagtggaagagcaggaagagaaggcccaggaaaagtt
tatagaatatataccaaagatgaatatgacagtatgaagccttttttaatacccgaaata
tttagatctgatcttacacaaatatatctggagctaaaggcaatgaatataaaaaatcca
ctagactttaactttccagagaatcccaaaaaagaactttttattcattcagcaaaaatg
ttatttaaaataaaagcaatagatgtaaataataatttaacagaattaggaagacaaata
tctttacttccccttagtcctatttatgggaatatgttactatcagctgtttcttttaat
tgtgttgatgaaatggctacattaatagcgcttttaaattgtgatagcatttttttaaat
tttaattttgatgatgaatttgatgatgcagataccaatttggcaacaatggctagtaaa
gggaatgggaaaaatgaaaatagaaataaagataaaagtaaaaaggaagatgaagattat
gatgaacttaaaataaatgataaacataaaattattaatatcgctagaaaaaaattaata
catccagatggtgatcatttaacaatattacatgttttttatttatgggaagaagaatta
acaaatagtggaaaaaaacaattttgtaatatgtatggattaaataatgaagttttaata
aatgtacaaaaaattaaaaaacaattattagaaatattatcaaataaattaaaaataaaa
ataaataaaaaattacatatgcataattgggataatattatgatgtctttatgtaaatca
tgttattttaatgttgcaaaacatatatcaaattcttcagtttttatgaatttagtaaca
aaaactaaattacgtatacatccttcttctactctctttaattcttttactaaaccctcg
tttatcttttattcggatgttgtgcaaacaaaaagattatatgcgcgtgttgtcacaaaa
gtagaccctgaatggctaatcaagtttgtcccaaaaaattttcaaatagccaaagattaa
DBGET
integrated database retrieval system
