Plasmodium chabaudi: PCHAS_0818400
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Entry
PCHAS_0818400 CDS
T01108
Name
(RefSeq) N-glycosylase/DNA lyase, putative
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
pcb
Plasmodium chabaudi
Pathway
pcb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pcb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PCHAS_0818400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcb03400
]
PCHAS_0818400
Enzymes [BR:
pcb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PCHAS_0818400
DNA repair and recombination proteins [BR:
pcb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PCHAS_0818400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
3497733
NCBI-ProteinID:
XP_744614
UniProt:
A0A4V0K7F3
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All DBs
Position
8:complement(759603..761282)
Genome browser
AA seq
559 aa
AA seq
DB search
MNVYYIFLILILNKIHAYRCYFPKTEGWVKMGYKVKIDNGTKLKRKNTQCSYSMEIKTSP
TSRMTSQSIKGKHDLKKNNMMNNLMSKVEIKKEIQHDTPPKLINNYDYKNFSSDNISKSS
TSLIKNYKNNWITLNATPNDLQLKYCLLIGQEFHFKQVEDCSYIGMVNKKIYLFKETRDK
ILYQCIFNMNKEENDTNTELSDNPNCNDSEKKDDDIDIHEFFNLSFPLEDQIKEWIEKDK
RMEEISNKIKGLRILKNEPVESFFSFLCSTNNNIPRITLMIDCLRRRYGEYIATVIFTND
DIIILNQQNEGNKKSTVYKIKTDIKKEKGLDNCLGEGGIQNISKETSNENKIFYESMKTE
VKEEGKNKIFHFYKFPSIETISNLKESDLRDLGFGYRSGYVIESAKMLKDLGGEEWIEDL
KKEKKTKACIDKLIKFPGVGLKVANCICLFGLNRYDCIPIDTHIYDIIYKYYSDIIEDDN
GKNKKASSRTRLTPNNGADKKTNKNSKDTRLSVKPQKKALTTALYIKLFTKLKDIFGPNC
GWAQTILFASELRKFTHLF
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtttattatatttttttaattttgatattaaacaaaatacatgcttataggtgt
tatttcccaaaaacagaggggtgggtaaaaatggggtataaggtaaaaattgataatggg
acaaaattaaagcgaaaaaatacacaatgttcatatagtatggaaataaaaacctcgcct
acgagtagaatgacaagtcaatccattaagggaaaacatgatttaaaaaaaaacaatatg
atgaataatttaatgagtaaagtagaaataaaaaaggaaatacaacatgatacccctcct
aaattgataaacaattatgattataaaaattttagttctgataatataagtaaatcttct
actagtttaatcaaaaattataaaaataattggatcacattaaatgctacaccaaatgat
ctacaattaaaatattgcctactgattgggcaagagtttcattttaaacaagtagaagac
tgttcatacattggaatggtaaataaaaaaatatacttatttaaagaaactcgtgataaa
atattataccaatgtatattcaatatgaataaagaagagaatgatacaaacactgaactt
tctgataatccaaattgtaatgattcagaaaaaaaagatgatgatatagatattcatgaa
ttttttaatttatcttttcctttagaagatcaaataaaggaatggatagaaaaagacaaa
agaatggaagaaatatcaaataaaataaaaggtttaagaatattaaaaaatgaaccagta
gaatcgttcttttcatttttatgttctactaataataatataccaaggataacattaatg
attgattgtttaagacgaagatatggggaatatattgcaacggtgatatttacaaatgat
gatataattattttaaatcagcaaaatgaaggaaataaaaaaagtactgtatataagatt
aagacagacataaaaaaggaaaaaggtttagataactgtttaggagaaggaggcatacaa
aacatatctaaagaaacatccaatgaaaataaaatattttatgaaagtatgaaaacagaa
gtaaaagaagaagggaaaaataaaatatttcatttttataaattcccaagtattgaaaca
atatcaaatttaaaagaatcggatttaagagatttaggatttggttatagaagtggatat
gttatagaaagtgcaaaaatgttaaaagatttaggaggtgaagaatggattgaagattta
aaaaaagaaaaaaaaacaaaagcatgtatagataagttaataaaatttccaggtgttgga
ctaaaagtagctaactgtatttgtttattcggtttaaacagatatgattgtatacccata
gatacacacatatatgatattatttataaatattatagcgatataatagaagatgataat
ggaaaaaataaaaaagctagcagtcgaactagactaactccaaacaatggtgctgataaa
aaaacaaataaaaattcgaaggatactcgtctcagtgtaaaacctcaaaaaaaagcatta
actacagcattatatataaaattatttacaaaattaaaagatatttttggccccaattgt
ggatgggcacaaaccattttgtttgcttcggaactaagaaaatttacacatctattttag
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