Plasmodium chabaudi: PCHAS_0907800
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Entry
PCHAS_0907800 CDS
T01108
Name
(RefSeq) replication factor C subunit 5, putative
KO
K10756
replication factor C subunit 3/5
Organism
pcb
Plasmodium chabaudi
Pathway
pcb03030
DNA replication
pcb03410
Base excision repair
pcb03420
Nucleotide excision repair
pcb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pcb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PCHAS_0907800
03410 Base excision repair
PCHAS_0907800
03420 Nucleotide excision repair
PCHAS_0907800
03430 Mismatch repair
PCHAS_0907800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcb03032
]
PCHAS_0907800
03036 Chromosome and associated proteins [BR:
pcb03036
]
PCHAS_0907800
03400 DNA repair and recombination proteins [BR:
pcb03400
]
PCHAS_0907800
DNA replication proteins [BR:
pcb03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
PCHAS_0907800
DNA Replication Termination Factors
ELG1-RFC complex
PCHAS_0907800
Chromosome and associated proteins [BR:
pcb03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
PCHAS_0907800
DNA repair and recombination proteins [BR:
pcb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
PCHAS_0907800
Check point factors
HRAD17(Rad24)-RFC complex
PCHAS_0907800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
nSTAND3
RNA_helicase
Ribosomal_S10
TIG
NB-ARC
RFC_C
Motif
Other DBs
NCBI-GeneID:
3498519
NCBI-ProteinID:
XP_016655312
UniProt:
A0A077XCN5
LinkDB
All DBs
Position
9:complement(347944..348993)
Genome browser
AA seq
349 aa
AA seq
DB search
MWLEKYAPRSLDELNIHKDITARLKKLSAHNDLPHIIFYGAPGGGKSTRIDCLIKEIFKD
EKIIRRPENITNAESKININVIQSNYHLELQCFELGTKDKIIVQSIIKELCSYKSSASFF
SKKPMYRIFVFKDAEFLSEGAQAGLRRTLETYIRNARVILHLEHLSKIIEPLKSRCICIR
VPLPTEEEIFTVLKNICDNENVSSSYNSTNFFKTLINTHGRNLRKCIMALEMTVYSNSDK
PHHSISVAHTYINELCNFVFINPTQIKIKECVTKIQSLITCQIPVNFIFETTIKYLLNSK
YDNKLKYYFLRLSSHFSYLSECSYDKSISLIAFIINANTAILKYSSSKK
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgtggcttgaaaaatacgcgccaagaagcctcgatgaattaaatattcacaaggatata
actgcgcgtctgaaaaagttaagtgcccacaatgacttgcctcatataatattttatggg
gctcctggtgggggtaaaagcacaagaattgattgcttaataaaagagatttttaaagac
gagaaaataattcgacgtcccgaaaatataacgaatgcagaaagtaaaataaatataaat
gtaatacaaagtaattatcatttagaattacaatgttttgaattaggaacaaaagataaa
attatagtacaaagtataataaaagaattatgtagctataaatctagtgcatcctttttt
tcaaaaaagccaatgtataggatatttgtttttaaggatgctgaatttttaagtgaagga
gcacaagcaggattaagacgaactttagaaacctatatacgaaatgctagagttatttta
catttagagcatttatcaaaaattatcgaaccattaaaaagtcgatgtatatgtataaga
gttccattacctactgaagaagaaatatttacagtattaaaaaatatatgcgataatgaa
aatgtatcatcaagttataattcgacaaatttttttaaaacattaattaatacacatgga
agaaatttaagaaaatgtattatggcattagaaatgacagtgtattcaaattcagataaa
cctcatcattctatatcagtggctcatacttatataaatgaattatgtaattttgttttt
ataaatccaacacaaattaaaatcaaagagtgtgtaacaaaaatacaaagtttaataact
tgccaaatacccgttaattttatttttgaaactactattaaatatttattaaacagtaaa
tatgataataaacttaaatattactttttacgattatcatctcatttttcatatctttca
gaatgttcatatgacaaaagtatttcacttatcgcatttattataaatgcaaatacagcc
atattaaaatattcttcatccaaaaaatga
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