Plasmodium chabaudi: PCHAS_0920500
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Entry
PCHAS_0920500 CDS
T01108
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1, putative
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
pcb
Plasmodium chabaudi
Pathway
pcb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PCHAS_0920500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcb03019
]
PCHAS_0920500
Messenger RNA biogenesis [BR:
pcb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
PCHAS_0920500
mRNA degradation factors
5'-3' decay
Lsm complex
PCHAS_0920500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
3496425
NCBI-ProteinID:
XP_743323
UniProt:
A0A077XET2
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All DBs
Position
9:complement(802609..803398)
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AA seq
142 aa
AA seq
DB search
MEQIFNPLWLSSFEEDIDTYIFISSRDNKLYLGILRTYDQHGNIFLTHCVEKIIIPEQNY
FSDVYVGNLIIRGDNIAYFGSIDESKYEKMFNYSQKDINENSQGENLYEENKKEDIILNY
KPINQILKYIDKANNDSTIFEN
NT seq
429 nt
NT seq
+upstream
nt +downstream
nt
atggaacaaatattcaacccactatggctaagtagctttgaagaagatatagatacatac
atttttatttcttcgagagataacaaattatatttaggtatactaagaacatatgaccaa
catggaaatatatttttaactcactgtgttgaaaaaattataatacctgaacagaattat
ttttctgacgtttatgttggaaacttaataattcgaggagataatattgcatattttgga
tcgattgatgaaagtaaatatgaaaaaatgtttaattattcccaaaaagatataaatgaa
aattctcaaggagaaaatttatatgaagaaaataaaaaggaagacatcattcttaattat
aagccaataaatcaaattttaaaatatattgataaagcaaacaatgatagtacaattttt
gaaaactag
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