Plasmodium chabaudi: PCHAS_0934300
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Entry
PCHAS_0934300 CDS
T01108
Name
(RefSeq) ATP-dependent RNA helicase DBP10, putative
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
pcb
Plasmodium chabaudi
Brite
KEGG Orthology (KO) [BR:
pcb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcb03009
]
PCHAS_0934300
Enzymes [BR:
pcb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PCHAS_0934300
Ribosome biogenesis [BR:
pcb03009
]
Eukaryotic type
Pre-60S particles
Helicases
PCHAS_0934300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_22
Motif
Other DBs
NCBI-GeneID:
3498982
NCBI-ProteinID:
XP_016655442
UniProt:
A0A4V6M9F4
LinkDB
All DBs
Position
9:complement(1256407..1259727)
Genome browser
AA seq
1106 aa
AA seq
DB search
MKLKKAKNKKNKRNDKNNSKSNYGKGKKTKIGKNYKNNTEMKGSKIKGSKMKSSKEKRIN
KAGGKINKKSSENSVESSKKRYSWLFDKSENKKNNGIDNGMDSDIDSDVGSDEPKGVKKK
LVLYKKRKKKGKVVLSCFQNLGLSKQMCKSISSNLKYNRPTDIQKLSIPKILNKKDVICI
SKTGSGKSLVYLSTLIDMLREHSKFFGIRGLIILPTKELVIQIYKLAKRLCTNYFNLKIN
IIIGGISLCKQFEILKENIDILICTPGRLSYILDETKLSLEKVEVIVIDEADRLLELNYY
NDMNNIYKCLGNKNLNKQTILISATLPTNVENYFKLKLNNPEIVFVNSDNNISPQINLHF
LFCRSYEKYAILIKLILLFKQKRLGKTIIFFCTKYHILFFSKILNFLKINHSTLYGNSDT
SFRFNQINNFTKHDDIQFLLVTDLASRGINITSVQNVINYNLPFSPKIFLHRIGRACRME
GQSGYGISIVTYQDILYAYEICFFIGKKLKFIKDSTTSSAPSYEVEPEQTSKPAEPADQT
DEPADPSAAPDGGKENSVYLGAIQNISEYLELIDNAKRMDTELVSLNKSIDLSYKLYYSM
RPKVSKYASTKFIKKIKKIGGIYKLCLLKHPNPIYDISENGEANKNETDNKNDDVMNEID
NVFKNLTNFLKNNPNSSNAKVADLDNENGTKNVDTPQDEPEASNINTNLPDELNDDPNLE
AYNDVDHQQDFPQNYVESFLHGFQYRSSTKLKSVSEEIKDKLDKLKEKIKKNKNTKNNCI
SNDINGLLDTITLGLNNEEDQNWEDEELEYNNNLDQPNILDEKKKKKKNKLSKRAQKKLK
KNNNTTSPDDIQKKENISLDDILKKINDKKMKRDSNNKILELNTPGFDLLPDEEDELNKQ
RFVKKNIWDKKKNKFVLTEVDTFQTDKKANKKIDGKNSSDKNTTTSIYQKWVKRTKNRIK
NVGELEDNYDNNNKRNKIKEIFIENQKNYEQDVKETNLNVLKENHPEITEALSKNIKLTK
KQQRIYKKYITGKYNKQDSNELKTLNQIQQDKKKELKRRLKTDRNFRAKYAHLMKKKHQR
KLENMKNLKSARSRSLAIVRKKIAKK
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttaaaaaagcaaagaacaagaaaaacaaaaggaatgacaaaaacaatagtaaa
agtaactatgggaaggggaaaaaaacaaagatcggaaaaaattataaaaataataccgaa
atgaaaggtagcaaaataaaaggcagcaaaatgaaaagcagcaaagaaaaacggataaac
aaggcaggcggaaaaataaataaaaagtctagtgaaaactctgtagagagttcaaaaaaa
agatactcgtggctgttcgataaaagtgaaaataaaaaaaataatggcatagataatggc
atggatagtgacatagatagcgacgtagggagtgacgaacctaaaggagtgaaaaaaaaa
ttagtgttatataaaaagcgtaaaaagaaagggaaggttgttttaagttgctttcaaaac
ttaggattaagcaaacaaatgtgtaaaagtataagtagcaatttaaaatataatagacca
acagatatacaaaaattaagtatccctaaaattttaaataaaaaagatgttatatgtatt
agtaaaacaggatcaggaaagtcgttagtatatttgagcacattaatagatatgctaaga
gaacatagtaaattttttggtatccgaggtttaataatattacctacaaaggagttagtt
atacaaatatataaattggcaaaaagattatgcacaaattattttaatttaaaaataaat
ataataataggaggaataagtttatgtaaacaatttgaaatactcaaagaaaatattgat
atacttatatgtacaccaggaagattatcatatatacttgatgaaacgaaattaagttta
gaaaaggtagaagttattgttattgatgaagcagatagattattagaattaaattattat
aatgatatgaataatatatataaatgtttaggaaataaaaatttaaataaacagacaata
ttaattagcgcaaccttaccaacaaatgttgaaaattattttaaattaaaattaaataat
cctgaaattgtatttgttaattcagataataatataagtccacaaattaatttacatttt
ttattttgtagatcttatgaaaaatatgctatacttattaaattaattttattatttaaa
caaaaaaggttaggaaaaactattattttcttttgtactaagtatcatattttatttttt
agtaaaattttaaactttttaaaaattaatcattcgaccttatatggaaattcagataca
tcttttcgatttaatcaaattaataattttacaaaacatgatgatatccaatttttgtta
gtcactgatttagcatcaagaggtattaatattacatcagttcaaaatgttataaattat
aatctcccattctctccaaaaatatttttacatcgaattggtagagcatgtagaatggaa
ggacaatccggctatggcatatccatagtcacgtaccaagatattttatatgcatatgaa
atttgcttttttatcggaaaaaaattaaaatttataaaggactccacaaccagctctgct
ccctcctatgaggtagaaccggagcaaacttctaaacctgctgagcctgctgaccaaact
gatgaacctgccgacccaagtgcagcccctgatggggggaaagaaaatagtgtatactta
ggggcaatacaaaatataagcgaatatttggaacttatagataatgctaaaagaatggat
actgaattagtgtcactaaataaaagcattgatttgtcatataaattatattattctatg
cgccctaaagtatcgaaatatgcaagtacaaaatttataaaaaaaattaaaaaaatcgga
ggaatatataaactatgtcttcttaaacatccaaatcctatttatgatatatcagaaaat
ggtgaagcaaacaaaaatgaaacagacaataagaatgatgacgtcatgaacgaaattgat
aatgtctttaaaaatttaacaaactttttaaaaaataatccaaactcgagcaatgcaaag
gtggctgacttagacaatgagaacggcacaaaaaatgttgacactcctcaagatgaaccc
gaagccagcaacataaacacgaaccttcctgacgagctgaatgacgaccccaatttggaa
gcatacaacgatgtggatcatcagcaagattttccacaaaactatgtagagtcctttttg
catgggtttcaatacagaagtagtaccaaattaaaaagcgtatccgaagagattaaagac
aaacttgataaattaaaagaaaaaattaaaaaaaataaaaacacaaaaaataattgcata
tcgaatgatattaatgggctactagacacaataactcttggacttaacaatgaagaagat
caaaattgggaagatgaagaattagaatataataacaatcttgatcaaccaaatatatta
gatgaaaaaaaaaaaaaaaaaaaaaataaactaagtaaaagagctcaaaaaaaattaaaa
aaaaataataatacaacttcacctgatgatatacaaaaaaaagaaaacatatcattagat
gatattttaaaaaaaataaacgataaaaaaatgaaaagagattcaaataataaaatatta
gaattaaatacacctggttttgatttacttccagatgaagaagatgaattaaataaacaa
cgttttgtcaaaaaaaatatatgggacaaaaagaaaaacaaatttgtattaacagaagtt
gatacattccaaacagataaaaaagcaaataaaaaaatcgatggaaaaaattcatctgat
aaaaatacaactacaagtatatatcaaaaatgggtaaagcgaacaaaaaatcgaattaaa
aatgttggagaattagaagataattatgataataataataaacgaaataaaattaaagaa
atatttatagaaaatcaaaaaaattatgaacaagatgtgaaagaaacgaatcttaatgta
ctaaaagaaaatcatcctgaaataactgaagcattatctaaaaatattaaattaacaaaa
aaacaacaaagaatatataaaaaatatattactggaaaatataataaacaagatagtaat
gaattaaaaactttaaatcaaattcaacaagataaaaaaaaagaattaaaaagacgactc
aaaacagatcgaaactttagggcaaaatatgcacatttgatgaaaaaaaaacatcaacga
aaactcgagaatatgaaaaatctaaaaagcgctcggtccaggtccttggccattgtccga
aagaaaatcgcaaagaaatag
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