Plasmodium chabaudi: PCHAS_0936600
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Entry
PCHAS_0936600 CDS
T01108
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm8, putative
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
pcb
Plasmodium chabaudi
Pathway
pcb03018
RNA degradation
pcb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PCHAS_0936600
09123 Folding, sorting and degradation
03018 RNA degradation
PCHAS_0936600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcb03019
]
PCHAS_0936600
03041 Spliceosome [BR:
pcb03041
]
PCHAS_0936600
Messenger RNA biogenesis [BR:
pcb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
PCHAS_0936600
mRNA degradation factors
5'-3' decay
Lsm complex
PCHAS_0936600
Spliceosome [BR:
pcb03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
PCHAS_0936600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
3495093
NCBI-ProteinID:
XP_016655452
UniProt:
A0A077XCF1
LinkDB
All DBs
Position
9:1336045..1336665
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AA seq
95 aa
AA seq
DB search
MASINIESYIENEILVITKDGRIFTGKLKGFDQTTNIILGNCYERIYKESLEKISLGIYI
IRGDNVTLIGEIDEEVDRNILQNKIKPEMLKPIIY
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atggcttctataaatattgaatcatatatagaaaatgaaatattagtcattactaaagat
ggtagaatatttacaggaaaattaaaagggtttgatcaaacaacaaatataatactagga
aattgttatgaaaggatatacaaagaatctttggaaaaaataagcttaggaatatatatt
ataagaggagataatgtaacactaataggggaaatagacgaagaggtggatagaaacatc
cttcaaaataaaattaaacccgaaatgctcaaaccaataatatactag
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