Plasmodium chabaudi: PCHAS_1012400
Help
Entry
PCHAS_1012400 CDS
T01108
Name
(RefSeq) chromatin assembly factor 1 P55 subunit, putative
KO
K10752
histone-binding protein RBBP4
Organism
pcb
Plasmodium chabaudi
Pathway
pcb03082
ATP-dependent chromatin remodeling
pcb03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pcb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
PCHAS_1012400
03083 Polycomb repressive complex
PCHAS_1012400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcb03036
]
PCHAS_1012400
Chromosome and associated proteins [BR:
pcb03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
PCHAS_1012400
Histone modification proteins
HAT complexes
HATB complex
PCHAS_1012400
HDAC complexes
Sin3A-HDAC complex
PCHAS_1012400
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
PCHAS_1012400
PRC2.2
PCHAS_1012400
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
PCHAS_1012400
Heterochromatin formation proteins
Other heterochromatin formation proteins
PCHAS_1012400
Chromatin remodeling factors
NuRD complex
PCHAS_1012400
NuRF complex
PCHAS_1012400
NuRF complex (fruit fly)
PCHAS_1012400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
CAF1C_H4-bd
WD40
WD40_Prp19
Beta-prop_EML_2
Beta-prop_EIPR1
WDR55
Beta-prop_RIG_2nd
WD40_WDHD1_1st
EIF3I
MIOS_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_WDR35_TULP_N
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_SCAP
WD40_RFWD3
TTR-52
Motif
Other DBs
NCBI-GeneID:
3491630
NCBI-ProteinID:
XP_016655536
UniProt:
A0A4V0K1Z7
LinkDB
All DBs
Position
10:complement(532890..534607)
Genome browser
AA seq
454 aa
AA seq
DB search
MKKQGNNLNNFNDINNKNEEPQSNYINANVENSKYWQYNTILLYNVIMIYNCEWPSLFVE
WMPNVYKRSQDYYSQDLILGTYSTEKNNYILVLEVSLPSEELSQSNFYYDKIGDFRHNSS
NDTTNKFKIKKKIYHECEINKISCNPEKNNIIACFSSNGNIHILNLNDYEYDETELKNSI
VYNFDYTLKGHSGEGWGLQWDKETNLIASCADDSYLCVWDINSSSISNDNVSVKCDTTTD
PSLANTNDNSSKGMIQPVIKFFNNNIPLEDCCWRDQNILTVSDDGQLHIYDIRSKNAVNS
IKVTSHTLNAIDVNPHNKNIFATGGTNKEIDLWDIRYTNKSLHRIISQKENIIKLQWDKY
QPGILSSSSSDKYIYFFDTNKIGIEQTYEDSQDGPPELIFIHGGHSSNVLDFSLNSSYSM
MISSISEDNSLQIWQPSRQAYEDESDSHDDTDVE
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacagggtaataacctgaataattttaatgatataaataataaaaatgaagaa
ccacaatccaattacataaatgccaatgtagaaaattcaaagtattggcaatataacaca
atcttgctttataatgtaattatgatatataactgtgaatggccgtccctctttgttgaa
tggatgcccaacgtgtacaaacgaagccaggattattactctcaagacttaatactaggg
acgtatagcactgagaaaaataactacatcctcgttttagaagtgagtttaccaagcgaa
gagctatctcaatccaatttttattacgacaagattggagattttagacataattcatct
aatgatacaacgaataaatttaagataaaaaaaaaaatatatcatgaatgtgaaataaat
aaaataagttgtaatcccgaaaaaaacaacattatagcttgtttttcatccaatggaaat
atacatattttaaatttaaatgattatgaatatgatgaaacagaattaaagaatagtatt
gtatataattttgattatactttaaaaggtcattcaggtgaaggatggggattacaatgg
gataaagaaacgaatttgatagcatcgtgtgcagatgattcctatttatgtgtatgggat
ataaattccagtagtatatccaatgataatgttagtgtaaaatgtgatacaactacagac
ccatcgctagctaataccaatgataattcttctaaaggtatgatacaacctgttattaaa
ttttttaataataacattccattggaagattgttgttggcgtgatcaaaacatattaaca
gtgtcagatgatgggcaattacatatatatgatatacgtagtaagaatgcagtaaattca
ataaaggtcacaagtcatacattaaatgcaattgatgttaatccacataataagaatata
tttgcaacaggtggaacaaataaagaaattgatttatgggatattcgttatactaataaa
tcattacatcgaataatttcccaaaaagaaaatataataaaattacaatgggataagtat
cagccaggaattttatcatcatcatctagcgataaatatatttatttttttgatactaat
aagattggaatagagcaaacttatgaggattctcaagatggtccacctgaacttatattt
attcatggtggtcattcttcaaatgtattagatttttctcttaattcatcttattcaatg
atgatctcttctattagtgaggataactctcttcagatttggcagccatcacgacaagcc
tatgaagacgagtcagatagccatgatgatacagatgttgaataa
DBGET
integrated database retrieval system
