Plasmodium chabaudi: PCHAS_1025100
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Entry
PCHAS_1025100 CDS
T01108
Name
(RefSeq) ATP-dependent RNA helicase DBP4, putative
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
pcb
Plasmodium chabaudi
Brite
KEGG Orthology (KO) [BR:
pcb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcb03009
]
PCHAS_1025100
Enzymes [BR:
pcb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PCHAS_1025100
Ribosome biogenesis [BR:
pcb03009
]
Eukaryotic type
90S particles
Helicases
PCHAS_1025100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
Motif
Other DBs
NCBI-GeneID:
3493508
NCBI-ProteinID:
XP_016655605
UniProt:
A0A4V0K2S1
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All DBs
Position
10:947799..950645
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AA seq
864 aa
AA seq
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MIDYKRKIDKNNKIHNKNYHNKVKKHKGNKQFRKNSNADERAQLQKEIDEKLSFIVEENK
RKQYDELRLNIENEQKKDIENEKKKKKKNDSGAAESDNEVKRYKNNLTIIDKNVLTQQEF
KSLPISKKTLRSLNENNFTHMTNIQSVSIPIVLLNKHIYAQAQTGTGKTLCFCVPLIEKL
YRDNIDSSNKILGGLIITPTRELVFQIFEVLNMLNKYHKLNICCAIGGKDEEREKAIFSY
SNIIVCTPGRLLYHLENNYYCNLDYLSTLIIDEIDKLIDKSFYDNLKSILLYKPKDNCQI
CLFSATICKFLNIILKTFNIKDYEYVSINNNDKYIESNNIKQIYIECSIYDKINYLYTFL
FSKKNRKIIVFFSTCKQVRFMFEVFKKIKVGVMKFLQLHGKLKQTSRLNTYHLFSKKNNF
VCLFTTDIACRGLDFASVDWVIHFDFPDNLETFIHRSGRTGRFTNVGNSLIFLTNETDNK
KYFLNVLRENNIEIVEKFIKKQKLFDINKKIHSLNAAFVEIKHLAKKALIIYLRHLYIIM
KFRGIKNLDLNQLAYAYGLIEFSQEMMDELNINDGNKIEMKKKRSRFEKFLEILKARKSK
KGGKEGNGEDANENKRDTMNKSEYNNPDDSDESENKLKPNKTQKSRDIAKENTTSDNDDI
TNMQEEDDLFVPQRVEIEDSGPLLLPTKKRRKRVKVAKMLSNSVLYDDVGNEINDENVKF
KILVNELNENEEMEQSDIEGKDTETDDEHTKNKRDEKSYIELLKEKVEKDNEQIKIDKLK
KKENMMNRDNSDNSDEQSDYDKESSSYQEDDYSSSENSSIMNDQVDDTKKMNKLIDKKSQ
TKKQKEDKLTENISDLEDKVMMFL
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgatagactataaaaggaagatcgataaaaataataaaatccacaataaaaactatcat
aataaggtaaaaaagcacaaaggaaataaacagtttcgaaaaaatagcaatgcagatgaa
agggcacaactacaaaaagagattgacgaaaagttaagctttatagtggaagaaaataaa
aggaagcaatatgatgaattgagactcaatatagaaaacgaacaaaaaaaagatatagaa
aatgaaaaaaaaaagaaaaagaaaaatgatagtggggcagcagaaagtgataacgaagtt
aagaggtataaaaataacttaactataattgacaaaaatgtattaacacaacaagaattt
aaaagtttaccaataagtaaaaaaacattaagatcattaaatgaaaataattttactcat
atgacaaatatacaatcggtgtctatacctatcgttttattaaataaacatatatatgct
caagcacaaactggaacaggaaaaacattatgtttttgtgtaccattaattgaaaaactt
tatagagataacattgatagttctaataaaatattaggaggattaattataactccaaca
agagaattagtatttcaaatatttgaagttttaaacatgttaaataaatatcataaatta
aatatttgttgtgcaataggcggaaaagatgaagaaagagaaaaagcaatttttagttat
tccaatattatagtatgtacaccaggcagattattatatcatttagaaaataattattat
tgtaatttagactatttaagtactttaataattgatgaaattgataaattaattgataaa
agtttttatgataatttaaaaagtattttattatataaacctaaagacaattgtcaaatt
tgtttattttcagccacaatatgtaaatttttaaatatcatattaaaaacatttaacatt
aaagattatgaatacgtcagtataaataataatgataaatatatagaaagtaataatata
aaacaaatatatattgaatgcagtatatatgacaaaattaattatttatatactttttta
ttttcaaaaaaaaatagaaaaataattgtttttttttcaacatgcaaacaagttcgattt
atgtttgaagtttttaaaaaaattaaagtgggagttatgaaatttttacaattacatgga
aaattaaagcaaacatcacgattaaacacatatcatttattttcaaaaaaaaataatttt
gtttgtttatttacaacagatatagcttgtagaggtcttgattttgcttcagttgattgg
gttatacattttgatttcccagacaatttagaaacatttattcatagatcgggtagaact
ggtagatttactaatgtaggaaatagtcttatctttttaacaaatgagactgataataaa
aaatattttttaaatgtattaagggaaaataatattgaaatagtggagaaatttattaaa
aaacaaaaactttttgatattaataaaaaaatacattctttaaacgcagcgtttgttgaa
attaaacatttagcaaagaaagcattgatcatttatttaaggcatttatatattattatg
aaatttagaggtattaaaaatcttgatttaaatcagctagcctatgcatatgggcttatc
gaattttctcaagaaatgatggatgagttgaatataaatgatggaaataaaattgaaatg
aaaaagaagagatccagatttgaaaagtttttagaaatactcaaagctcgcaagtcgaaa
aagggaggaaaagaaggaaatggggaggatgcgaatgaaaataaaagggataccatgaac
aagtcagaatataacaatcctgatgatagtgatgaatcagagaataaattgaaaccaaac
aaaactcaaaagtcaagagacatagcaaaagaaaacacaacttcagacaatgatgatatt
acgaatatgcaagaagaggatgatttatttgttcctcaaagagttgaaattgaagacagt
ggacctttattattaccaactaaaaaaaggagaaagcgagtcaaggtagctaaaatgcta
agtaatagtgtattatatgatgatgtagggaatgaaataaatgatgaaaatgtaaagttt
aagatattggtaaatgaattaaatgaaaatgaagaaatggaacaaagtgatatagaaggt
aaagatactgaaacagatgatgagcatacaaagaacaagcgtgatgaaaaatcatatatt
gaattattaaaagaaaaagttgaaaaagataatgagcaaataaaaatcgataagctaaag
aaaaaagaaaatatgatgaatagagataattccgataattcagatgaacaatctgattat
gacaaggaatcatcatcttatcaagaggacgactatagcagttctgaaaatagtagcatc
atgaatgaccaagtggatgataccaaaaaaatgaataaattaattgataagaaatctcaa
accaaaaaacaaaaagaagacaaattaactgaaaatatatcagatttagaggacaaagta
atgatgtttttataa
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