Plasmodium chabaudi: PCHAS_1122000
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Entry
PCHAS_1122000 CDS
T01108
Name
(RefSeq) conserved Plasmodium protein, unknown function
KO
K13095
splicing factor 1
Organism
pcb
Plasmodium chabaudi
Pathway
pcb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PCHAS_1122000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcb03041
]
PCHAS_1122000
Spliceosome [BR:
pcb03041
]
Complex A
Other components
Complex A specific factors
PCHAS_1122000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC_3
KH_12
Motif
Other DBs
NCBI-GeneID:
3496576
NCBI-ProteinID:
XP_743472
UniProt:
A0A4V0K917
LinkDB
All DBs
Position
11:<773236..>775135
Genome browser
AA seq
590 aa
AA seq
DB search
MHYDPLVALSTLSPIEKLSDENSKKKSRWGNNANNSLENKVVPSKWGDENYKPYLPLPFV
DFPPGLTPSQLDQFLREQRYDELTKKLNKGELEHVDPDIRPASPPPIYDKNGNRINTREA
RIKNSMIEEHHRLVEYLLKHVEGFVAPSNYKPIKKIRKIEIPIDKYPEYNFMGLIIGPRG
CNHKRLEAESGAQISIRGKGTQKEGKKTDHQTDIEANMPKHVHISADTEECVERAVSLIT
PLLDPTHPLHEEFKKKGLEQLALVNGINLNQLETQRCAMCNSTTHLTHECPENMNIQNFK
KPEIKCNLCGDHGHITLDCKLAKQNNFMKNNFDPANIPAPPPDDGMTSTYDRKNNHPYIN
KQDKTQMDMEYQKMMSELNKDWDGTNNQKGNKKNANNYPLNDNTNDGYSFPPNPNNFSDT
SNNKQHNKNYGHPMMPQMNMKNMNNPNFIPLGKSNNSFNDDIKNVSHQNYYDNYNTKTGI
NNNDNEQNFNANMNYQGMGNMPLNPPLPMLPNFFNFSPFMNNAFPQAGALPYPNGQQMPM
DPMYMQAFPGWPQIPMNYSEDFLAQAAAPDTNPPPLPSENANPPEETNDM
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgcattacgatcctttggtagccctatctacattatcaccgatagaaaaattatcggat
gaaaattccaaaaaaaaatcaagatggggaaataatgcaaataattctttagaaaataaa
gtagtcccaagtaaatggggcgatgaaaattacaaaccatatttgccattaccatttgta
gatttcccaccaggtttaacaccttcacaattagatcaatttttaagggaacaaagatat
gatgaattaacaaaaaaattaaataaaggggagttagagcatgttgatccagatataaga
cctgcatcacctccaccaatttatgataaaaatggtaatagaataaatactagagaagct
cgaattaaaaatagtatgattgaagagcatcatagattagttgaatatttattaaaacat
gttgaaggttttgtagctccttcgaattataaacctattaaaaagattcgtaaaattgaa
ataccaattgataaatatccagaatataattttatgggattaataattggaccaagaggg
tgtaaccataaaaggttagaagccgaaagtggtgcacaaataagtataagaggtaaaggt
acacaaaaagaaggaaaaaaaacagatcaccaaacagatattgaagcaaatatgcctaag
catgttcatatatcagcagatactgaagaatgtgttgaaagagcagtaagtttaataact
ccattgttagatcctacacatccattacatgaagaatttaaaaaaaaaggtttagaacaa
ctagcattagtaaatggaataaatttaaatcaattagaaactcaaagatgtgcaatgtgt
aattcaacaacacatttaacacatgaatgtccagaaaatatgaatatacaaaattttaaa
aagcctgaaataaaatgtaatttatgtggtgaccatggtcatataacacttgattgtaaa
ctagccaaacaaaataattttatgaaaaataatttcgacccagctaatatacctgcacca
ccacccgatgatggaatgacttctacttatgacagaaaaaataatcacccttacataaat
aagcaagataaaacacaaatggatatggaatatcaaaaaatgatgagcgaattaaataaa
gattgggatggtactaataatcaaaaaggaaacaaaaaaaatgcaaataattatccttta
aatgataatacaaatgatggttattcattccccccaaatcctaacaatttttcagataca
tcaaataataaacaacataataaaaattatggtcatcctatgatgccacaaatgaatatg
aaaaatatgaataatccaaattttattccattaggaaaaagtaataattcatttaatgat
gatataaaaaatgttagtcatcaaaattattatgataattataatacaaaaacgggtata
aataataatgataatgaacaaaattttaatgcaaatatgaattatcaagggatgggcaat
atgccattaaatccaccattaccaatgttaccaaatttttttaatttttcgccatttatg
aataatgcctttcctcaagccggagcattgccataccccaatggccagcaaatgcccatg
gaccccatgtacatgcaagcctttcctgggtggccacaaattcctatgaactattcagag
gatttcctggcgcaagctgctgcccctgacaccaatccaccacctcttccatcagaaaat
gcaaacccccccgaagaaacaaatgatatgtag
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