Plasmodium chabaudi: PCHAS_1129600
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Entry
PCHAS_1129600 CDS
T01108
Name
(RefSeq) RNA polymerase II transcription factor B subunit 4, putative
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
pcb
Plasmodium chabaudi
Pathway
pcb03022
Basal transcription factors
pcb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pcb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PCHAS_1129600
09124 Replication and repair
03420 Nucleotide excision repair
PCHAS_1129600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcb03021
]
PCHAS_1129600
03400 DNA repair and recombination proteins [BR:
pcb03400
]
PCHAS_1129600
Transcription machinery [BR:
pcb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PCHAS_1129600
DNA repair and recombination proteins [BR:
pcb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PCHAS_1129600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
3499143
NCBI-ProteinID:
XP_746016
UniProt:
A0A077TNB8
LinkDB
All DBs
Position
11:1078192..1079175
Genome browser
AA seq
327 aa
AA seq
DB search
MHKNEEVDGTNGESLKDKKLAMSHLILVIDVNFLIWSQGLKIKFDKNNIKTVKLSQFLKS
VFQFTRFYCFMSSSERICIIATCSGNSKIIYENYISYTKNNLTENDYCTNAYDKLIKFIK
DNNNNSKTYEMVESTLSSALAIALCYNNRICNLYENINSRIFLLDISKSHFYTNQYTQLM
NIAYNAKRNNIIIDVFSLNHKTQILEQICNITNGLYIDNSIFLSITCGDNVEDILTQTIM
FWFLPSTNSRKYFSNTYLNEDTNIAVCTCHNKQIDIAYICSCCLAIYCSEKDAQTNKERI
SCSICKTRFTKALLRNKTVSDLNFTTI
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgcacaaaaatgaagaagttgatggaacaaatggggaaagcttaaaggataaaaagctg
gctatgagccacttaattttagtaattgatgtaaattttttgatatggagccaaggatta
aaaataaagtttgataagaataatataaaaactgtaaaattgtctcaatttttaaaatcc
gtttttcaatttacgcgattttattgttttatgagcagttcagaaagaatatgtataata
gctacctgttcaggtaattccaaaataatatatgaaaattatatatcttatacaaaaaat
aatttaacagaaaatgattattgtactaatgcgtatgacaagttaataaaatttatcaaa
gataataataataatagtaagacctatgaaatggttgaaagcacattatcatcagcatta
gcaattgctttgtgttataataacagaatatgtaatttatatgaaaatataaattcaaga
atatttttacttgatatatcaaaaagccatttttatacaaatcaatatacacaactaatg
aatatagcatataatgctaaacgaaataatataataattgatgttttttctcttaaccat
aaaactcaaatacttgaacaaatctgtaatattactaatgggctatatatagataatagt
atttttttaagtattacttgtggtgataatgtggaagatatattaactcaaaccataatg
ttttggtttttaccttctactaattccagaaaatatttttcaaatacttatttaaatgaa
gatactaatatagctgtctgtacatgtcataataaacaaattgatatagcttatatatgt
tcatgttgtttggctatttattgctctgaaaaggatgcccaaacaaataaggaaagaatt
tcatgctctatatgtaaaacacgatttaccaaggctctcttgcgaaacaaaacagtatcc
gatttgaatttcacgactatttag
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