KEGG   Plasmodium chabaudi: PCHAS_1144200
Entry
PCHAS_1144200     CDS       T01108                                 
Name
(RefSeq) DNA repair endonuclease XPF, putative
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
pcb  Plasmodium chabaudi
Pathway
pcb03420  Nucleotide excision repair
pcb03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:pcb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    PCHAS_1144200
   03460 Fanconi anemia pathway
    PCHAS_1144200
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pcb03032]
    PCHAS_1144200
   03400 DNA repair and recombination proteins [BR:pcb03400]
    PCHAS_1144200
DNA replication proteins [BR:pcb03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    PCHAS_1144200
DNA repair and recombination proteins [BR:pcb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     PCHAS_1144200
SSDB
Motif
Pfam: ERCC4 IMS_HHH_1
Other DBs
NCBI-GeneID: 3492238
NCBI-ProteinID: XP_739185
UniProt: A0A4V0K9K9
LinkDB
Position
11:complement(<1584858..>1589345)
AA seq 1495 aa
MYPLYYEKKIVKKLIQDDSLILLTDGFSELSILAIFIFYYQNNCLWYEQHINDENIFFKL
FNLNIRNEIIDIDAIPEDHKSTDKINNENNINEIKSITNISQNNNEHGEIESSKDNPKQG
DDNFHYQNIHDTDKISYPTIHINPNANKNKLIFILNVSPKEYNMFLKYQLSLYEGISKFD
ISFNSSIKINYLKTEYIRNQKANERIEMYIKRGVYFISSNILLIDLLTYKIIPEIIDGIF
ICRSHKLMYSMKENFIIDLYRKRNKFGFIKGINNNKKLVKNQQISNISKKLYMKKIYCYP
RFHKNIHISLNNKLIQPNIYEINIDLPIVLKKMEDNILNLIHYINIEIKKIHKFEDFDIN
SLLYSDNPENYTMNYIKNKNLTYNTKKLLKEIIILVNLLYNLYIYDDIIFYNYINNIKEA
DKEAIWMYCNEANELFYLANERKDIFLNKIDVNIESNVLHTSPNKNAMHTIISMLQYKNK
YFLKSNEIKREQNKIYNWVHDLVFNRDIPLTQYQKIILKTKKKKKKHTNNNFTKRKGNTF
HDDFLLNKKNKHHINSDTDTSQEKMQLIQTNPNCSNPVRIKVEKDDESYTSSNNNRIKNI
SQIKVKKEQNYVPSENHYVIDDSQSSEPDSENCLEDKQTKSQTNSKIYQDTSDNPSENNQ
SNNINISPITKKNTNSNKNNEKQNQSSVKNKQNKTTETIEKVNYPIVIITDNFYTQKEIY
NILAHKEEQNANINEIFIKSEDEIKEYYISDDLINSESSTSKSFEDNKDRLFCDNTSFHI
PYKAIKNKTNNLKYIKPCIYIICINKNYEVMYSSENFVNKCFQKIDKINNDTKKGDIEED
TQNHLAICALENNENESQKFKSDIRKNENANLFEINEFCGNLDFLELFLMKIKPYRIILT
KLDLHIFRNIEIYCARIFKYNLYKLTKHKNFKELVMYEKNNLMYDNISPDKIVVKKEKQM
DAKKNNTKGKQINQDNYYTNKGIDKGAKNYELIKTMNDMCNTIEVYILFYKDNIFYNKYL
NNIKNEKENWIDFIEHKNTLRFEIDRNVFNKNKEMFKSVIDSYFLFQKKLKENKKNIINF
NKNLCEQFKNFQEVKANDVTADIVLYNNDDNVNKNNTNFISIEEDELFLENLRKKINKKN
NEITNLDDKKLLKMQEILKYYSIDSFNLNFILYSIFNNTKPIVIVDIRELKSDLSYKLYK
SKMHIIPYSLLVGDYILTKDICVERKTIIDLIQSLNNNRLYNQINQMSKYYSIYVLLIEF
NNKHLFYFASLNNKHSIYTKLVTISLQFPRLKILWSPFSLFTAKLFWSLKVNADQPDIFK
SLHIDITLQKDAQNDYDITYEETELQLVDKIETQGNDSQNLEIENSEQQQYQPTNELLND
DNTSANIVTNDNKEKPPSEDTYKYETINDLLDEKLNNAEKPNTSSTIKKMENVTNWNAIE
ILKALPGVTEKNMHKIINNVKSLYDLCEKSLDELENYMSKNNAKLLYNFLNADVS
NT seq 4488 nt   +upstreamnt  +downstreamnt
atgtatcctttatattatgaaaagaaaatagtgaagaaacttatacaagatgattctcta
attttactcacagatgggtttagcgaactaagcattctagcaatatttattttttattat
caaaataattgcttgtggtatgagcaacatataaatgatgaaaatatattctttaaacta
ttcaatttgaacatccgcaacgaaattattgatattgacgccattccagaggatcataaa
tccactgataaaataaataatgaaaataatatcaatgaaattaaaagtattacaaacatt
tcacaaaataataatgaacatggagagatagaatccagtaaagacaaccccaagcaaggg
gatgataactttcattatcaaaatattcatgataccgataagataagctaccccactata
cacattaatcctaatgcgaacaaaaataaacttatatttatattaaatgtttccccaaaa
gaatataatatgtttttaaaatatcaactttccttatacgaagggattagcaaatttgat
atttcatttaatagtagtataaaaattaattacttaaaaacagaatatatacgtaatcaa
aaagcaaatgaaagaatagaaatgtacataaaacgcggggtgtatttcatatcatccaat
attttattaatagacctattaacatacaaaatcattcctgaaattattgatggcatattt
atatgtcgaagtcacaaacttatgtatagtatgaaagaaaattttattatcgatttatat
agaaaaagaaataaatttggatttattaaaggaataaataataataaaaagctagtaaaa
aatcagcaaatatcaaatatttctaaaaaattatacatgaaaaaaatatattgctaccca
cgatttcataaaaatatacacatttcattaaataataaattaatacaaccaaacatatat
gaaattaatatagatttgccaattgtattaaaaaaaatggaagacaacatattaaatttg
attcattatataaatatagaaattaaaaaaatacacaagtttgaagactttgatataaac
tcattattatattcagacaacccagaaaattatactatgaattatattaagaataaaaat
cttacatataatacaaaaaaattacttaaagaaattattatattagtcaacttattatat
aatctatatatttatgatgatattattttttataattatattaataatataaaagaggca
gacaaagaagccatatggatgtattgtaatgaagcaaatgaattattctatttagcaaat
gaaagaaaagatatttttttaaataaaattgatgtaaacattgaatcgaatgtattacat
acatcacccaacaaaaatgccatgcacactattattagtatgctccaatataaaaataaa
tactttcttaaatctaatgaaattaaaagagaacaaaataaaatatataactgggtacat
gatttagtgttcaatagagatatacccttaacccagtaccaaaaaattatcttaaaaacg
aaaaaaaaaaaaaaaaaacacacaaataataactttacaaaaaggaaaggcaatactttt
catgatgattttttattaaataaaaaaaataagcatcatattaatagcgacacagataca
agccaagaaaaaatgcaactgattcagacaaaccctaattgttctaacccagttaggata
aaagttgaaaaggacgatgaatcatatacgtcttccaataataatcgaataaaaaatatt
agtcaaataaaggttaaaaaggaacaaaattatgtaccttctgaaaaccactatgtgatt
gatgattctcaaagtagcgaaccagatagtgaaaattgcttagaagataaacaaacgaag
agccagacaaattccaaaatatatcaagataccagtgataatcctagcgaaaataatcag
agtaataatatcaatatatcgcctataacaaaaaaaaataccaatagcaataaaaataat
gaaaaacaaaaccaaagttcagtgaaaaataagcagaataaaacaactgaaactattgaa
aaggtaaattaccctatcgtcattattacagataatttttatacacaaaaagaaatatac
aatatactagctcacaaagaagaacaaaatgctaatataaacgagatatttattaagtct
gaagatgaaattaaagaatactatatatcagatgatttaataaactcggaaagcagtaca
agcaaatcgtttgaggataataaagataggttattttgtgacaatacaagctttcacatt
ccttataaagctattaaaaataaaactaataatctcaaatacattaaaccatgtatttat
attatatgcataaataaaaattacgaagttatgtattcctctgaaaattttgttaataaa
tgctttcaaaaaatagacaaaataaataatgatactaagaaaggggatatagaagaagat
acacaaaatcatttagccatatgtgcattagaaaataatgaaaatgaatcacaaaaattt
aaatcagacatccgaaaaaatgaaaatgcaaatttattcgaaataaacgaattttgtgga
aacttagactttttggaattatttttgatgaaaataaagccatatagaattattctcaca
aaattagatttgcatatttttagaaatatagaaatatactgtgctcgaatattcaaatat
aacctttacaaattaacgaaacataaaaattttaaagaactagtgatgtatgaaaaaaat
aacttaatgtacgataatattagccccgataaaattgttgtaaagaaagagaaacaaatg
gatgcaaagaaaaataatacaaaaggaaaacaaataaatcaggataattattatacgaat
aaaggtatagacaaaggggccaaaaattatgaactaataaaaactatgaacgacatgtgt
aatactattgaagtttatatcttattttacaaggataatatcttttacaataaatattta
aataatatcaaaaatgaaaaagaaaattggatagattttattgaacataaaaatacactt
cgattcgaaatagatcgcaatgtattcaataaaaataaagaaatgtttaaaagtgtgata
gattcgtattttttatttcaaaaaaaacttaaagaaaataaaaaaaatataataaatttc
aacaaaaacctatgcgaacagtttaaaaattttcaagaagttaaagcaaatgacgtaaca
gctgatatcgttctttacaacaacgatgataatgtaaataaaaacaacactaattttata
agtatagaagaagatgaattatttttagaaaatttaagaaaaaaaatcaataaaaaaaat
aatgaaattactaatcttgatgataaaaaattattaaagatgcaagaaatactaaaatat
tattcaatagactcatttaacttaaattttatattatatagcatatttaataataccaaa
cctatagttattgttgatataagagaacttaaatcggatttgtcatataaattatataaa
agcaaaatgcatatcataccatattcattacttgttggtgattatatattaacaaaagat
atatgtgtcgaaagaaaaaccattattgatttaatacaatctttaaataataaccgattg
tataaccaaattaatcaaatgtcaaaatattattctatatatgttttattaatagaattt
aataataaacaccttttttattttgcttcattaaataataaacattctatatatacaaaa
ttggtaacaatttctcttcaatttcctcgacttaaaattttatggagcccattttcactc
tttaccgctaaacttttttggtctcttaaagttaatgctgatcaacctgatatattcaaa
tcccttcatattgacataactttacaaaaagatgcacaaaacgattatgacattacatat
gaggagactgagcttcagttagttgataagatagaaactcaaggaaatgattcccaaaat
ttagagattgaaaattccgaacaacaacagtatcaacccactaatgagttacttaatgat
gataatacttctgcgaacattgttacaaacgataataaagaaaaacctccttctgaagat
acttacaaatatgaaaccataaatgatttactcgatgaaaaattaaacaacgcagaaaaa
cctaatacaagttccaccataaaaaaaatggaaaatgttaccaattggaatgcaattgaa
attttaaaagctctacctggagttactgaaaaaaacatgcataaaataataaacaatgtc
aagtcattatatgatttgtgtgaaaaatcattagatgaacttgaaaattatatgagtaaa
aacaatgcaaaattgttatacaactttttaaatgcagatgtatcatga

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