Plasmodium chabaudi: PCHAS_1212000
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Entry
PCHAS_1212000 CDS
T01108
Name
(RefSeq) autophagy-related protein 18, putative
KO
K22991
WD repeat-containing protein 45
Organism
pcb
Plasmodium chabaudi
Brite
KEGG Orthology (KO) [BR:
pcb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcb04131
]
PCHAS_1212000
Membrane trafficking [BR:
pcb04131
]
Autophagy
Other autophagy associated proteins
Others
PCHAS_1212000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
BCAS3_WD40
WDR55
EIF3I
WD40_CDC20-Fz
ANAPC4_WD40
WD40_Prp19
Beta-prop_EML
Beta-prop_HPS5
NBCH_WD40
RMC1_N
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
DUF5711
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
3489491
NCBI-ProteinID:
XP_016654201
UniProt:
A0A077TRQ8
LinkDB
All DBs
Position
12:complement(399382..400613)
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AA seq
380 aa
AA seq
DB search
MVSLRLDNNRYIAFNQDYGCLCMANEKGFKIYNTNPFTQTYSRDLTDRNKNGLYIAEMLY
RCNILAITGNKNDRKGKWAKNVLIIWDDRQMREIAKLTFSSNIIGVRLLREIIVVILEYK
LCIYRLKDIILLETLNTAKNPSGLCCLSNIDKNIIIAYLSPIKGRVNIHIFEKNASENVH
EELPYINFKTDLSIYAHDNPIACINLSNDGKLLVTASTKGTIIRLFNTFDGSILNEFRRG
TKNAKILSLNISNDNNWLCLTSNRNTVHVFSIYKRARPPRKVDIISKGKNISSHVMLNYE
KEPKNKKSSIKCLLPCHPYLNSDWSFSSYKIPGKKISSICAFVSDQNCIIVICSNGLIYK
LRFNEHIGGEMLKISSHSFD
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggtatcattaagattagataataatagatatatagcttttaatcaagattatggctgt
ctgtgtatggccaatgaaaaaggatttaaaatttacaatacaaaccctttcactcaaacg
tatagtagagatttaactgatcgaaataaaaatggattatacatagcagaaatgctttat
cgttgtaatattttagcaataaccggaaacaaaaatgatagaaaaggaaaatgggcaaaa
aatgttttaataatatgggatgatagacaaatgagagaaatagcaaaattgacattttca
tcaaacattattggtgtgagattattaagagaaataattgtggttattttagaatataaa
ttatgtatatacagattaaaagatataatattattagaaaccctaaatacagcaaaaaat
ccatcaggattatgttgcttatcaaacattgataaaaatattattattgcatatttgtca
cctataaaaggtcgagttaatattcatatatttgaaaaaaatgctagtgaaaatgttcat
gaagaactcccttatataaattttaaaacagatttaagtatatatgctcatgataatcca
attgcatgtataaatttaagtaatgatggaaaactattggtaaccgcatccacaaaagga
acaattataagattatttaatactttcgatggaagtatattaaacgaatttagaagaggt
actaaaaatgctaaaatattatctttaaatatcagtaatgataataattggttgtgttta
acttcaaatagaaatactgtacatgtattttctatatataaaagagcccgccccccaaga
aaagtagatataatatctaaaggaaaaaatatatcttcacatgttatgctaaattatgaa
aaagaaccaaaaaataaaaaatcatctattaaatgcttattaccttgtcatccatattta
aatagtgattggagtttttcatcatataaaatccccgggaaaaaaatatcatcaatttgt
gcatttgtaagcgaccaaaattgtattattgttatatgttcaaacggattaatttataaa
ttgagatttaatgagcatataggaggagagatgcttaagatatcttcccatagctttgat
taa
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