Plasmodium chabaudi: PCHAS_1233100
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Entry
PCHAS_1233100 CDS
T01108
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit B, putative
KO
K03253
translation initiation factor 3 subunit B
Organism
pcb
Plasmodium chabaudi
Brite
KEGG Orthology (KO) [BR:
pcb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcb03019
]
PCHAS_1233100
03012 Translation factors [BR:
pcb03012
]
PCHAS_1233100
Messenger RNA biogenesis [BR:
pcb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
PCHAS_1233100
Translation factors [BR:
pcb03012
]
Eukaryotic type
Initiation factors
eIF-3
PCHAS_1233100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF2A
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
RRM_1
ANAPC4_WD40
WD40_Prp19
DUF3886
Motif
Other DBs
NCBI-GeneID:
3494946
NCBI-ProteinID:
XP_741862
UniProt:
A0A077TN64
LinkDB
All DBs
Position
12:1219282..1221432
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AA seq
716 aa
AA seq
DB search
MVKVEESELSDKELVDFLSDDSDDGNETLLNKKYAGKEALITLETKFPKIVTILGIPKVE
EEKHSRLAEVLKKLFIRHLSAKISDSSIMNIKIHMPVDDEKKTKGICFVTFHDSFQANEA
VKVLNKLKLDAKHLLTASKMDDIENIINRDERVMPINVVGFTREKIRWWLYDEKCREQFI
VRYDSHFEVHWLDPLEKEPQLIYTTFKKNAPFSSVQWSNQGSYLVSFHNPGIALWGGDNF
EKLIRLQHKSVKDISFSPNENYVLTWDGTPASLRNEKSICIWRVITGKLLRSFITPEYSP
REKIFPHFLWSPDDKYIACIGKQKEVYIYELPSMLLLEDHEKKRTPLKYSVVKEFDWSPV
DNIVAIWIPETNNTPGTLILVEIPSRKELVSRKIYDVSQASIHWQSKGDYLCLKTTIVKK
IGKKGKKEHTQLEIFRMREKNIPVDNIQIEGVKTKQFHWEESNSNRFALIVRDEATSRQQ
IRFYKILNKGATRNVKWTSTFDINNQMNFMKWSPQGTFFILASLLSEGMLYFCFLNSNDE
VEVIHKDEHLLVNSVAWSNCGRYLVTSVSNLSGISSSNYKEENSETGFYIWTFQGRCLMT
VKKPSFYQFFFRPHPKSLFSDKLKIDIKNNLKDYSKKFDVIDEKIRNSKKNQLISERKNV
ENSFNEKLEKITKLFQSFKEYELFRRNWETFESQFEWEEKTVVIEHVLSVKQEIFA
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggttaaagttgaagaaagcgaattaagcgacaaggaacttgtcgattttttatcagat
gatagtgatgatggaaatgaaactttgttaaataaaaaatatgcaggaaaagaagccttg
attacacttgaaacaaagtttcctaaaatcgttacaatattaggtataccaaaagtagaa
gaagaaaaacatagtaggttagcagaagttttaaagaaattatttataaggcatttaagt
gccaaaataagtgattcttcaataatgaatataaaaatccatatgccagtagatgatgaa
aaaaaaacaaaaggaatatgctttgttacatttcatgatagttttcaagcaaatgaagca
gtaaaggtattaaataaattaaaattggatgcaaaacatttattaacagcatccaaaatg
gatgatatagaaaatataataaatagggatgagcgtgtaatgcctataaatgttgttggt
tttacaagagaaaaaatcagatggtggttatatgatgaaaaatgtcgagaacaatttatt
gttcgatatgatagtcattttgaagttcattggttagatcctttagaaaaagaaccacaa
ttaatttatactacatttaaaaagaatgctccgttctcaagtgtccaatggagtaaccaa
gggtcatacttagtcagttttcataacccaggtattgcattatggggtggagataatttt
gaaaaattaataaggctacaacataaaagtgttaaagatataagtttttcaccaaatgaa
aattatgtactaacttgggatggtactcctgcttcattaagaaatgaaaaatctatttgt
atatggagagtaataacaggaaaattgcttcgttcttttatcacacctgaatatagtcca
agagaaaaaatatttccccattttttatggagccctgatgataaatatattgcatgtata
ggaaaacaaaaagaagtatatatatatgaattaccatctatgttattattagaagatcat
gaaaaaaaaagaactccactaaaatattcagtcgttaaagagtttgattggtcacctgta
gataatatagttgcaatttggattccagaaacaaataatacaccaggaactttgatatta
gtagaaataccatctagaaaagaattagtatctagaaaaatttatgatgttagtcaagca
tctattcattggcaaagtaaaggagattatttatgtcttaaaacaactattgtaaaaaaa
attggaaaaaaaggaaaaaaagaacatacacaattagaaatatttagaatgagagaaaaa
aatatacctgtagataatatacaaatcgaaggagtaaaaacaaaacaatttcattgggaa
gaatcaaatagtaatagatttgcattaatagtaagagatgaagctacaagtagacaacaa
ataagattttataaaatattaaataaaggtgctacaagaaatgtaaaatggactagtaca
tttgatataaataatcaaatgaattttatgaaatggtcaccacaaggaaccttttttata
ttagcttccttactatcagaaggaatgttatatttctgtttcttaaattcaaatgatgaa
gttgaagttatacataaagatgaacatttgttagtaaattctgttgcatggagtaattgt
ggtagataccttgttacatctgtttcgaatttatctggtatatcaagttctaattataaa
gaagaaaatagtgaaacaggtttttatatatggacttttcaaggtagatgtttaatgact
gttaaaaaaccatcattttatcaattcttttttcgacctcatccaaaatcattatttagt
gataaattgaaaattgatataaaaaataatctaaaagattattctaaaaaattcgatgtt
atagatgaaaaaattagaaactctaaaaagaatcaattaatttcagaaagaaaaaatgtt
gaaaattcatttaatgaaaaattggagaaaatcacaaaattatttcaatcctttaaagaa
tatgaactgttcagaagaaattgggaaacatttgaaagccaatttgaatgggaagaaaaa
acagttgtcatcgaacatgtcctttctgttaagcaggaaatcttcgcatag
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