Plasmodium chabaudi: PCHAS_1321100
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Entry
PCHAS_1321100 CDS
T01108
Name
(RefSeq) tRNA intron endonuclease, putative
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
pcb
Plasmodium chabaudi
Brite
KEGG Orthology (KO) [BR:
pcb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcb03016
]
PCHAS_1321100
Enzymes [BR:
pcb01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
PCHAS_1321100
Transfer RNA biogenesis [BR:
pcb03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
PCHAS_1321100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
Motif
Other DBs
NCBI-GeneID:
3494934
NCBI-ProteinID:
XP_741850
UniProt:
A0A4V0KAC9
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All DBs
Position
13:<821370..>821894
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AA seq
97 aa
AA seq
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MTNRIAKREIVYNDLNNHFVVINDIKYGSDFALYKESVDHEHAFALVFVKDESSILTDKE
KIIISRICESVKKRGIIAYVDDHTKTIKYEELTRNKK
NT seq
294 nt
NT seq
+upstream
nt +downstream
nt
atgactaatagaattgcaaaaagagaaattgtatataacgatttaaataaccattttgtt
gtaataaatgacataaagtatggatctgattttgcactatataaagagagtgtggaccac
gaacatgcctttgctctcgtttttgtaaaagacgaatcttcaattttaactgataaggaa
aaaattatcatttctagaatatgtgaaagtgttaagaaaaggggaataattgcatatgta
gatgatcacaccaagacaattaaatatgaggaattaaccaggaacaaaaaataa
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