Plasmodium chabaudi: PCHAS_1326000
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Entry
PCHAS_1326000 CDS
T01108
Name
(RefSeq) ATP-dependent RNA helicase DBP5, putative
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
pcb
Plasmodium chabaudi
Pathway
pcb03013
Nucleocytoplasmic transport
pcb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PCHAS_1326000
03015 mRNA surveillance pathway
PCHAS_1326000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcb03019
]
PCHAS_1326000
Enzymes [BR:
pcb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PCHAS_1326000
Messenger RNA biogenesis [BR:
pcb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
PCHAS_1326000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DUF7054
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
3495874
NCBI-ProteinID:
XP_016654542
UniProt:
A0A4V0KAT9
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All DBs
Position
13:1005481..1007469
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AA seq
662 aa
AA seq
DB search
MSLTEEKPKEKIDEKNDEKADEKTNEQVDEKIKDENEKEDKDTPEKKEDENVMNMFLSYL
QKNKDDPKVLQTMLSMMGGKGGNTIPADLLKLAQGDNKKDDKSEENNAQSPSKVSQTNES
ENNDTGKSADNKKDKEGEKNDDVNGENKEVIKKKHSELVEDNDDYEIENCEPELPLEEEA
ISLIENINIENDEKNKGNKEDSIKKTNGVSVSANMAKLADKYMSGGKIADATGKEQSDFK
LYHSKNSWEELKIDNELIQILTYLKFFGPSKIQAYALPIILDSNRNLIAQSQNGSGKTLT
FVIAMLSKINRALYSLQAVCICPTRELAQQNYDVVGKFTKYLNVRTFLAVPLCEKYNKSN
GIQIYVGTPGKTLDFLKRKYIDTNNIKIFVLDEADDLIDIKNNMSSQVESIKRFLPKSCQ
ILLFSATYNDNVRVFADKFAPRATKISVRQEDLTLKCVKQYYLITENDEQKYYYLSELYC
SMTISQCVIFVNSKKSAYNLYQFMTENNHNVTLICADSVISRFTKNKVEKTNVMGMDPKT
RDSLMSDFKKGISKVLICTDLLSRGIDVPSISLVINFDLPYIYQGRITNSADAIANQNVN
METYIHRIGRTGRFGTKGMAINFISKMQMPHIQQIEKYYKCVISDLEYDSELMMTSITKL
KN
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgacagaagaaaaaccaaaagaaaaaatcgacgaaaaaaacgacgaaaaagcc
gacgaaaaaacaaatgaacaagttgacgaaaaaataaaagatgaaaatgagaaagaagat
aaagatacaccagaaaaaaaggaagatgaaaatgttatgaatatgtttttatcatattta
caaaaaaataaagatgatcccaaagttcttcaaactatgttaagtatgatggggggaaag
ggtggaaatacaataccagcagatttactaaaattagcacaaggtgataataaaaaagat
gataaatcagaagaaaataatgcccaaagcccatccaaagtaagccaaacaaatgaaagt
gaaaataatgataccggaaaatcggctgataataaaaaggataaagaaggggaaaaaaat
gatgacgtaaatggagaaaataaagaagttataaaaaaaaaacacagtgaattagtagaa
gataatgatgactatgaaattgaaaattgtgaaccagagttacctcttgaagaagaagca
atatcattaattgaaaacatcaacatagaaaatgatgaaaagaataagggtaataaagaa
gattctattaaaaaaacaaatggtgtttctgtttctgcaaatatggctaagctagctgat
aaatatatgagtggcggtaaaattgcagacgcaaccggaaaggaacaaagtgactttaaa
ttatatcattctaaaaattcatgggaagaattaaaaattgataatgaacttatacaaata
ttaacttacttaaaattttttggaccatcaaaaattcaagcatatgcattaccaatcata
ttagatagtaacagaaatttaattgcacaatcacaaaatgggtctggtaaaacattaact
tttgtaatagcaatgctatcaaaaatcaatagagcattatattcattacaagcagtttgt
atatgtccaaccagagaattagcacaacaaaattatgacgtcgttggtaaatttacaaaa
tatttaaacgttagaacatttttagctgttccattatgtgaaaaatataataaatctaat
ggtatccaaatatatgttggtactcctggtaaaactctagattttttaaaaagaaaatat
atcgacactaataatataaaaatatttgtgttagatgaagcagatgatttaattgatatt
aaaaataatatgtcatcacaagttgaaagtataaaaagatttttaccaaaaagttgtcaa
atacttttattttcagctacatataatgataatgtaagagtttttgctgataaatttgcc
ccaagagcaacaaaaataagtgtgagacaagaagatttaactttaaaatgtgttaaacaa
tattatttaataacagaaaatgatgaacaaaaatattactatttatctgaattatattgt
tctatgactatatcacaatgtgttatatttgttaattccaaaaaatcagcatataattta
tatcagtttatgacagaaaataatcacaacgttacactaatttgtgcagatagtgtaatt
agtagatttacaaaaaacaaagttgaaaaaacaaatgtaatgggtatggatcctaaaaca
agagattctttaatgtctgattttaaaaaaggtatatcaaaagttttaatatgtacagat
ctattatctagaggtattgatgttccatctataagtttggttattaattttgatttgcca
tatatttatcaaggtagaataactaattcagctgatgctatagcaaatcaaaatgtaaac
atggaaacttatattcatagaattggaagaacaggaagatttggaacaaagggtatggct
attaattttattagtaaaatgcaaatgccacatattcaacaaattgaaaaatattacaag
tgcgtaatttcagatcttgaatatgattcagaacttatgatgacctctataaccaagttg
aaaaattaa
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