Plasmodium chabaudi: PCHAS_1333300
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Entry
PCHAS_1333300 CDS
T01108
Name
(RefSeq) ribonuclease Z, putative
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
pcb
Plasmodium chabaudi
Brite
KEGG Orthology (KO) [BR:
pcb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcb03016
]
PCHAS_1333300
Enzymes [BR:
pcb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
PCHAS_1333300
Transfer RNA biogenesis [BR:
pcb03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
PCHAS_1333300
Prokaryotic type
PCHAS_1333300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B_6
Lactamase_B_4
Anti-Pycsar_Apyc1
Lactamase_B
Motif
Other DBs
NCBI-GeneID:
3495439
NCBI-ProteinID:
XP_016654581
UniProt:
A0A4V0KAK0
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All DBs
Position
13:1241754..1245275
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AA seq
848 aa
AA seq
DB search
MEVYIQMIGWHKLAIPSSLRLFVNGEFTLINCGENNQRFLNEHKMHIARIKNICFTKISP
ETIGGLIGLLLTIDNISDNAISIYGPKPIERIINNFTSSFAKIKNLKITIHEISDNNIFP
IILKGNVIITPILLNKQNVIATNQETDTIQNCEQPVLDKRKKMNEVSNTYDKESNNLYKN
KNGEIEEKFSPDEANSNCLKKRKLDIPEMERDETYEGKTEIVNDNNDNVKIEKSNSNTMK
STEIDKNSNMKQCIFYLIECPQTIGKFHVEKAQKLNIPPGKYYGMLKSGKSVTINNKIIN
PEDVCDKNIDGKKSLIIDLSDTEYIDYVITEIKNKENFYLNNLEYIFHLSDEKILSNKTY
KDYFLKLKNIKNIKCNQSNSSLKICPFISSSSLTNILSKLMPNIFLKYKPDDPIYELSSK
TLNNYDDEKSSNSSKSANNDSNSIPNGNFKNETECINSDNSFKNEDRIAKIEENTNQNSD
QQVINSNESKEEYTTYLSYNTLTKFVLHPFHKINICTDEMLTDLYPSTFNSSKFSNFTQE
NDNLMKPILDFNKKLNDNATMLPSFHFLGTGCSIPSAFRNVSGIILNIQKDFSVILDFGE
GSLYQLYWISKSWIQFTESIKSIKVIFISHAHADHHVGIYYFLYIRKILFPHLNPPLILI
PKTLKNWMNLFNELFLDIEMRIIYNENDLEIKEIISEDNFLTLHLFKVNHIKESYGIKLE
SKDIGSIVYSADTRPCDNVKRFAKDCNILIHEATFDDELLVEAINKKHSTIHEAMQISLD
VNCQTLILTHFSQRYPKAPILNKSSSAEINEIMNKTIYSFDYMYIPLNLIKELPTCFNIL
LNLLEKIF
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atggaagtctacattcaaatgatagggtggcataaactggcaataccgtctagtttgcgt
ttatttgtaaatggagagtttacactaattaattgtggggaaaataatcaaaggtttctg
aatgaacataaaatgcatatagcgcgaataaagaatatatgttttacaaaaataagccct
gaaactatcgggggactaattggtctacttttaacaatagataatatttcagataacgct
atttcaatttatggccccaaaccaatagaacgaataattaataattttactagctcattt
gcaaaaataaaaaatttgaaaataactatccatgaaatttcggataataatatattccca
attattctaaaaggaaatgtaattataaccccaattttacttaataaacaaaatgtaatt
gccacaaatcaagaaacagacacaattcaaaattgtgagcaacctgttctcgataaaaga
aaaaaaatgaatgaagtaagtaatacatatgataaggaatcaaataatttatataaaaac
aaaaatggagaaatagaagaaaaattttctcccgacgaagctaattcgaattgcttgaaa
aaaagaaaattggatatacctgaaatggaacgtgacgaaacatatgaaggtaaaacagaa
atagtgaatgataataatgacaatgtgaaaattgaaaaatcaaatagcaataccatgaaa
tctacagaaatagataaaaatagtaatatgaaacaatgtattttttatttaattgaatgt
ccacaaactattggtaaatttcatgttgaaaaggcacagaaattaaatattcctcctggg
aaatattacggaatgctaaaatctggaaaatctgttactataaataataaaataataaac
cctgaagatgtgtgtgataaaaatatagatggcaaaaaatcattaattattgatttatca
gatactgaatatatagattatgtaattactgagattaagaataaagaaaatttttattta
aataatttagaatatatttttcatttgtctgatgaaaaaattttaagtaataaaacatac
aaagattattttttaaaattgaagaatataaaaaatattaaatgcaaccaatctaatagt
tcattaaaaatatgcccttttatttcttcatcgtcattaaccaatatcctttcaaaatta
atgccaaatattttcttaaaatataagccagatgaccccatatatgaattatcttcaaag
acactgaataattatgatgatgaaaaaagttcgaattcatctaaaagcgccaataatgat
agcaattctattcccaatgggaattttaaaaatgaaacggaatgtataaattccgacaat
tcattcaagaatgaagatagaattgcaaaaattgaagaaaatacgaatcaaaatagtgat
caacaagtaataaatagcaatgagagtaaagaagaatatactacttatttgtcttataat
actttgacaaaatttgttttgcacccatttcataaaataaatatttgtacagatgaaatg
ctgactgatttatatccatctacttttaattcttccaaattttcaaattttacccaagaa
aatgataatttaatgaaacccattttggattttaataaaaaactaaatgataatgctacc
atgttgccttcttttcattttcttggaactggatgctcaataccatcggcatttcgtaat
gtatctggcattattttaaatattcaaaaagattttagcgttattttagattttggggaa
gggtccttatatcaactatactggataagcaaatcatggattcaatttacagaatccata
aaatctataaaagtgatattcatttctcatgcacacgccgatcatcatgtaggaatttat
tatttcctatacatacggaaaattttatttccgcatttaaatcccccattgatattaatt
cccaaaacattaaagaattggatgaatttatttaacgaattatttcttgatatagaaatg
aggattatttataatgaaaacgatttagagataaaagaaataattagtgaagataatttt
ttaactctccatctttttaaggttaatcatattaaggaatcatatggaataaaactcgag
agtaaagatattggttctattgtctattctgcagacacaagaccatgtgataacgtcaaa
agatttgcaaaggattgtaacattttaatacatgaagctacatttgatgatgaactgttg
gtcgaagccatcaacaaaaagcattcaactatccacgaagctatgcaaattagtctagat
gttaattgccaaactttaatattaacacattttagccaaagatacccaaaggctcctata
ctaaataaatcatcatctgccgagattaatgaaattatgaataaaacaatttatagcttc
gattatatgtacattcccttaaatttaataaaagaactgccaacatgctttaatatttta
ttaaatttattagaaaaaatattttaa
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