Plasmodium chabaudi: PCHAS_1341700
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Entry
PCHAS_1341700 CDS
T01108
Name
(RefSeq) splicing factor 1, putative
KO
K13091
RNA-binding protein 23/39
Organism
pcb
Plasmodium chabaudi
Brite
KEGG Orthology (KO) [BR:
pcb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcb03041
]
PCHAS_1341700
Spliceosome [BR:
pcb03041
]
Common components
Common spliceosomal components
General mRNP proteins
PCHAS_1341700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_10
Motif
Other DBs
NCBI-GeneID:
3489225
NCBI-ProteinID:
XP_016654636
UniProt:
A0A4V6M9Q1
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All DBs
Position
13:<1552674..>1554834
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AA seq
688 aa
AA seq
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MKMEEDNEHFDEEETIDKKKNKKKVNGSVKSQINDKNESDESSLRSDKRRKKSARGKATK
SKVTRRGRRKREDTEPDEEEEEKEEETDKVEKDENSNSSENEETQKSKNEEELDENDSKH
SSEPSEQGDQEEEQSDNDEKEKRKREKYKNVKHHNDERKSNSNGDKSSDSESEQDERRRS
RKREEKSESYKKDYHKKRRRKSNSSNDSDSSDDDEKRSHKSRSLKKRRHERRERRRHRDR
SRNRSRDRSRDRSRGRSRDRYRDRDRERRRERERERMRREREREIEREKRREERRKKEEL
EEAKRDDLTVLVLNLDLKADERDIYEFFSEVAGKVRDIQCIKDQRSGKSKGVAYVEFYTQ
ESVIKALAANGYMLKNRPIKVQSSQAEKNRAAKASKHHPIDPNDIPLKLYIGGLLGPLSN
ITEQELKQLFNPFGDILEVEIHRDPYTGKSKGFGFIQFHKASEAIEAMTVMNGMEVAGRE
IKVSYAQDSKYLLASDALKDLNIPNLNQIKAAAQGGRKTGNQEDEQDNEKIDNDDDDGGG
LITGASSKIALMQKLQRDTIIDASMPSGYATGANAIARNSLASVSNPLNNVTPNIVLCNM
FSPNDSNIGSDPDFFSDILEDVKGECSKYGNIIKIWLDTKNIDGKIYIKYTKNDESLKAF
QCLNGRYFGGSLINAYFITNAIWESTCC
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggaagaagataatgaacattttgatgaagaagaaactattgataaaaagaaa
aataaaaaaaaagtaaatggatcagtaaagtctcaaattaatgacaaaaatgaaagtgat
gaatcttcattaagaagtgataaacggcgaaaaaaaagcgcaagaggaaaagcaactaaa
agtaaggtaacccgaaggggacggagaaaacgggaagatacagaacccgatgaagaagaa
gaagaaaaagaagaagaaactgataaggtcgaaaaagatgaaaacagtaatagtagcgaa
aatgaggaaacacagaaaagtaaaaatgaagaggagttagatgaaaatgatagtaaacat
tcctcggagccttcagagcaaggcgaccaagaggaggaacaaagtgataatgatgaaaaa
gaaaaacgaaaaagagaaaaatataaaaatgtaaaacatcataatgatgaaaggaaaagt
aattcaaatggagataaaagttctgattcagaaagtgaacaagatgaaagaagaagaagt
agaaaaagggaagaaaaatcagaaagttataaaaaagattatcataaaaaaaggcgaaga
aaatcgaactcaagtaatgattctgattcaagtgatgatgatgagaagcgatcacataag
tcaagaagtttaaaaaaaagaaggcatgagaggcgagaaaggaggagacacagagataga
agccgcaaccgaagccgcgatcgaagccgagaccgaagtaggggcagaagcagggacaga
taccgagatagggatcgtgagagaaggcgtgaaagggaaagagaaagaatgcgaagagag
agagaaagagaaattgaaagagaaaaacgaagagaagaaagacgtaaaaaagaagaatta
gaagaagcaaaaagagatgatttaacagtattagtattaaatttagatttaaaagcagat
gaaagagatatatatgaatttttttcagaagttgcaggaaaagttcgtgatatacaatgt
ataaaagatcaaagatctggaaaatcaaaaggtgtagcatatgtagaattttatacacaa
gaatctgttataaaagcattagcagctaatggctatatgctaaaaaatagaccaataaaa
gttcaatcatctcaagctgaaaaaaatagagcagcaaaagctagtaagcatcatccaatc
gatcctaatgatattccattaaaattatatataggaggattattaggtcctttaagtaat
ataacagaacaagaattaaaacaattatttaatccttttggagatatattagaagtagaa
atacatagagacccatatactggtaaatcaaaaggttttgggttcatacaatttcataaa
gcttcagaagctattgaagctatgactgtaatgaatggaatggaagtagctggtcgagaa
ataaaagttagttatgctcaagattcaaaatatttattagcaagtgatgcattaaaagat
ttaaacatcccaaatttgaatcaaataaaagcagcagctcaaggaggtagaaaaactgga
aatcaagaagatgaacaagataatgaaaaaattgacaatgatgatgatgacggaggcgga
ttaataactggagccagtagcaaaattgctttaatgcaaaaattgcaaagagatacaata
attgatgcttcgatgccaagtggatatgccactggagcaaatgccatagcgagaaactcg
ttggctagtgtatcaaaccctttaaataatgtaacaccaaacattgttttatgtaatatg
ttttcaccaaatgatagtaatattgggtcggatcccgatttttttagtgacatacttgaa
gatgtaaagggagaatgcagtaaatatggaaatattattaaaatatggctagatactaaa
aatatagatggtaagatttatattaaatatacaaaaaatgatgaatcattaaaagctttt
caatgcttaaacggcagatattttggaggttcacttataaatgcatattttattacaaat
gctatatgggaatccacatgttgttaa
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