Plasmodium chabaudi: PCHAS_1348900
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Entry
PCHAS_1348900 CDS
T01108
Name
(RefSeq) chromatin assembly factor 1 subunit B, putative
KO
K10752
histone-binding protein RBBP4
Organism
pcb
Plasmodium chabaudi
Pathway
pcb03082
ATP-dependent chromatin remodeling
pcb03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pcb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
PCHAS_1348900
03083 Polycomb repressive complex
PCHAS_1348900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcb03036
]
PCHAS_1348900
Chromosome and associated proteins [BR:
pcb03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
PCHAS_1348900
Histone modification proteins
HAT complexes
HATB complex
PCHAS_1348900
HDAC complexes
Sin3A-HDAC complex
PCHAS_1348900
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
PCHAS_1348900
PRC2.2
PCHAS_1348900
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
PCHAS_1348900
Heterochromatin formation proteins
Other heterochromatin formation proteins
PCHAS_1348900
Chromatin remodeling factors
NuRD complex
PCHAS_1348900
NuRF complex
PCHAS_1348900
NuRF complex (fruit fly)
PCHAS_1348900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1C_H4-bd
WD40
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
WDR55
WD40_Prp19
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
EIF3I
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_WDR90_POC16_2nd
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
3492482
NCBI-ProteinID:
XP_739423
UniProt:
A0A4V0KBI6
LinkDB
All DBs
Position
13:complement(1831237..1832772)
Genome browser
AA seq
511 aa
AA seq
DB search
MTDVIAEKNKSYDISNTYEPKYPEENEANENTKVDITHEKYIIWRRNTPFLYSSLLKHKL
DWPSLTVEFIGVENSFKSKTGYFTNKILLGTHTSNQDSEYVYIGETKSPLYSAKEDVLQY
ENYTGFINNKKKKRGHPLPSFEIKAKLLHPGEVIRATHLPNNSFFIVTQTYNGNILLFDY
TKHPSFPSDIATCYPQMILKGHGSEGSGLCWNINKIYDNNIGDSKNTKNNIKDNENDTEN
TNDENFGEINTSNLLLASCASDGSICLWDINKGTKSNEVPRTYGINKVGKGADYNIKIYE
NTPTLSPLCTWINKNEETTLNDIFFHSKFNNILGVCDDNGYMSIYDIRKKNFFTRPEISY
KDHNQPMNTFSFDNFSEYIFASGYSDGLISIWDMRCNKESLLKIDYHTQSINRIKFCLMQ
SGIFGTCSDDGTACIWDMSRNSENYEQIKKLEDDIYNNPKKIPKQLLFVHGGHIGSVYDM
SWANTTTLLAATVGVDNSLQVWNMNEQFMFQ
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgacggatgtaatagctgaaaaaaataaaagttatgatataagtaatacatacgaacct
aaatatcccgaagaaaatgaagccaatgaaaataccaaagttgatataacacatgaaaag
tatataatatggagaaggaataccccatttttatatagttcccttttaaagcataaatta
gattggccttcattaactgttgaatttataggggttgaaaattcttttaaatcaaaaacc
ggatattttactaataaaatattattaggtacacacacatccaatcaagattcggaatat
gtatatataggtgaaacaaaatctccattatattcagctaaagaagatgtattacaatat
gaaaattatactggctttataaataataaaaaaaaaaaaagaggtcatccattaccgtct
tttgaaattaaagcaaaattattacatccaggagaagttataagagcaacccatttacca
aataattctttttttattgttacacaaacttataatggaaatatattattatttgattat
acaaagcatccttctttcccttccgatatagctacctgctacccacaaatgatattaaaa
gggcatggaagtgaaggtagtggtttatgttggaatataaataaaatatatgataataat
attggggatagtaagaatacaaagaataacataaaagataatgaaaacgataccgaaaac
acaaatgatgaaaattttggtgaaataaatacaagtaatttactgttagcttcatgtgct
tccgatggaagcatatgtctttgggatattaacaagggaacaaaaagtaatgaagttccc
agaacatatggaataaataaagtaggaaaaggtgcagattataatataaaaatatatgaa
aatactccaactttaagtcctttatgtacatggataaataaaaatgaagaaacaacatta
aatgatattttttttcattcaaagtttaataatattcttggtgtatgtgatgataatgga
tatatgagcatatatgatataagaaaaaaaaatttttttacaagaccagaaattagttat
aaagatcataatcagccaatgaatactttttcatttgataatttttctgaatatattttt
gctagtggatatagtgacggtttaatatctatttgggatatgaggtgcaataaagaatct
ttacttaaaattgattatcacacacaaagtattaacagaattaaattttgcctgatgcag
tcaggtatttttggaacatgttcagatgacggaactgcgtgtatttgggacatgtccaga
aattcagaaaattatgaacaaatcaaaaaattagaagatgatatttataataatcctaaa
aaaatacctaagcaattattgtttgttcatggtggacatattggaagtgtatatgatatg
tcttgggcaaacaccaccacattacttgccgctacagttggtgttgacaattctttacaa
gtatggaatatgaatgaacagttcatgtttcagtga
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