Plasmodium chabaudi: PCHAS_1352000
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Entry
PCHAS_1352000 CDS
T01108
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 1, putative
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
pcb
Plasmodium chabaudi
Pathway
pcb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pcb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PCHAS_1352000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcb03400
]
PCHAS_1352000
Enzymes [BR:
pcb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
PCHAS_1352000
DNA repair and recombination proteins [BR:
pcb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
PCHAS_1352000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-GeneID:
3494183
NCBI-ProteinID:
XP_741103
UniProt:
A0A4V0KBI1
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Position
13:complement(1920474..1922003)
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AA seq
509 aa
AA seq
DB search
MPSHCCRFVFHFLLYMLLINIAKNNIITALSHRHQTIRERNSAFSNNPINYIYYLGANKP
IYSKFSSVCEQKKLGHKKIAIKKWGIERNEKKNFTISLNYYNKIHQNKYMTKMVKENKAG
IKNEKKSSVNNTQDIRNFLNLKKEEKDEECDEKIKQDSNKESIKNETTVQKKKIDKNNKT
KEKVKTKSETNKSVNITYPSIPKSIEKRWEDYNKIIEYAKSTNVYLGAHISASGGVQNAP
INSFNVSGLAFALFLKNQRKWESPPLTEENIKQFDENCKKYNFDKNLILPHGSYLINLAN
PDKEKREKSYLSFVDDIKRCEQLNIKLYNFHPGSTVGMCSTEQGIKNIADCINRAHKETS
NVIIVLENSAGQKNSVGSKFEHLRDIISQVDDKERIGVCLDTCHTFAAGYDIKTYEKFEE
VMNNFHNIVDSKYLKAVHLNDSKSDLGSGLDRHENIGKGKLTLDTFKYIMTSKYFKNIPI
VLETPDITNDESVYKYEIEYLYKMCVKEE
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgcccagccattgttgccgctttgtttttcactttttgctgtatatgttactaattaat
attgctaaaaataatataattacagccctttcgcataggcatcaaactataagagaaaga
aatagcgccttttcaaacaaccccataaattatatatattatttaggagcaaataaacct
atttattccaaattttcatccgtctgtgaacagaaaaaactaggacataaaaaaatagct
ataaaaaagtggggcatagaaaggaacgaaaaaaaaaactttacaataagtctaaactat
tacaataaaatacaccaaaataaatatatgaccaaaatggtaaaagaaaataaagccggt
ataaaaaatgaaaaaaaaagttcagtaaataatacccaagatattagaaattttttgaat
ctcaaaaaggaggaaaaagatgaagaatgtgatgaaaaaataaagcaggatagtaataaa
gaaagtataaaaaatgaaacaactgttcagaaaaaaaaaattgataaaaataataagaca
aaagaaaaggtaaaaacgaaatctgaaacaaataaaagtgttaatataacatatcctagt
atacctaaaagtattgaaaaacgatgggaagattataataaaattatagaatatgcaaaa
agtacaaatgtttatttaggtgcacatatatcagcttcagggggagtccaaaatgctcca
ataaattcatttaatgtatcaggattagcatttgcattatttttgaaaaatcaaaggaaa
tgggaaagcccaccattaactgaagaaaatataaaacagtttgatgaaaattgtaaaaaa
tataattttgataaaaatttaattttaccacatggatcatatcttataaatttagcaaac
cctgataaagaaaaacgagaaaaatcatacttatcatttgtagatgatataaaaaggtgt
gaacaattaaatattaaattatataattttcatccaggttcaacagtaggaatgtgttca
acagaacaaggaataaaaaatattgctgattgtataaatagagcccataaagaaacatca
aatgttattatagttttagaaaattcagcaggacaaaaaaattcagtcggttcaaaattt
gaacatttacgtgatataatatctcaagttgatgacaaagaaagaataggtgtttgttta
gatacatgccatacatttgcagcaggctatgatataaaaacatatgaaaaatttgaagaa
gttatgaataattttcacaacattgtagattcaaaatatttaaaagctgtacatttaaat
gattcaaaatcggatttaggaagtggattagatagacatgaaaatattggaaaaggaaag
ttaacactagatacatttaaatatattatgacatcaaagtatttcaaaaacattccaatt
gttttagaaacacctgacataacaaatgacgaatctgtatacaagtacgaaattgagtat
ttgtacaagatgtgtgtaaaggaagaataa
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