Plasmodium chabaudi: PCHAS_1361500
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Entry
PCHAS_1361500 CDS
T01108
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein PRP4, putative
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
pcb
Plasmodium chabaudi
Pathway
pcb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PCHAS_1361500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcb03041
]
PCHAS_1361500
Spliceosome [BR:
pcb03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
PCHAS_1361500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
EIF3I
Beta-prop_TEP1_2nd
WD40_RFWD3
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
PRP4
WD40_MABP1-WDR62_2nd
Beta-prop_Aladin
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
RMC1_N
NBCH_WD40
WD_LRWD1
Beta-prop_SCAP
DUF7389
Motif
Other DBs
NCBI-GeneID:
3495823
NCBI-ProteinID:
XP_742728
UniProt:
A0A4V0KCM1
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All DBs
Position
13:2240284..2242143
Genome browser
AA seq
619 aa
AA seq
DB search
MKISDVINDYKSLDSNKLKNSDINSKKNNNDSILEEFEIKSKIRKVCLGIPTKDLEVKNV
LRLLKEPICLFGEDQYDKRNRLKRILVTRYDKLIIKNKGENIEEVEEFKNILKKYYIDFS
KIYDTTSPEYQKVNELEDELRNKGIKKDDATTKSGISDHILKEKFYTESTEELKLSRIDI
TLKTLPRIYLYKEMINNFQNKYSREQYENYISSYNEHMKSELDLYISQLGDSRPLTMGKF
SPDNSVFAVSSYNTYINIFNFKNDNYNLVKTLKNGHVDKINCIEWNYPNNYSYYTTTNYT
DINKNDLLLASCSSDKTFCIWKPFLYETNDGNNSSENYSKISNKSDTNDNNDGKKGRGKK
MKKNEKKNNNQEDGSENDENDSENRNNNDNSGDNKQPLLCKVKAHEDRINKICFHPLNKF
VLTCSEDETIKFFDIETQNELFYQEGHNSNVYSATFNPYGNLYLSGDAKGGLMLWDIRTG
RNIERKHMIHNNCIMNISFNPFMPNMFCTCSSDNTIKIFDLRNFTVSCNILAHNKIVTDA
IFEPTYGRYIASSSFDTYIKIWDTVNFYCTKILCNNDNKVRNVDISPDGNLISCTSFDRT
WKLYKIEEFEKENIMSDFV
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattagtgatgttataaacgactataaatcacttgatagtaataaactgaaaaat
agtgatataaatagcaaaaaaaataacaatgatagtatattggaagaattcgaaataaaa
agtaagataaggaaagtatgtctaggtattccaacaaaagatttggaggtaaaaaatgtt
ttaagattgttaaaagaacctatttgtttatttggggaagatcaatatgataaaagaaac
agattaaaacgtattttagttactagatatgataaattgataataaaaaacaaaggagaa
aatatagaagaagttgaagaatttaaaaatattttaaaaaaatattatattgattttagt
aaaatttatgatacaacttcacctgaatatcaaaaagtaaatgaacttgaagatgaattg
agaaataaaggaataaaaaaagatgatgctactacaaaaagtggtatatctgatcatata
ttaaaagaaaaattttacactgaaagtacagaagaattaaaattatctcgtatagatata
acattaaaaacattacctagaatatatttatataaagaaatgataaataattttcaaaat
aaatattcacgagaacagtatgaaaattatattagttcatataatgaacatatgaaatca
gaattagatttatatatttcacaattaggagatagcagaccattaactatgggaaaattt
tcaccagataatagtgtatttgcagtaagtagttacaatacatatataaatatatttaat
tttaaaaatgataattataatcttgttaaaacacttaaaaatggtcatgttgataaaata
aattgtattgaatggaattatccaaataattattcatattacactacaacgaattatact
gatataaataaaaatgatttgttattggcttcctgttcatctgataaaactttctgtata
tggaaaccatttttatacgaaacaaatgatggtaataattcttctgaaaattattctaaa
atatccaataaaagtgataccaatgataacaacgatggaaagaaggggagggggaaaaaa
atgaaaaaaaatgaaaaaaaaaataataaccaagaagatgggagcgaaaatgatgaaaat
gacagcgaaaacagaaataacaatgataacagtggagataacaaacagcctttactatgt
aaagttaaggctcatgaagatagaataaataaaatatgtttccatcctttaaataagttt
gtattaacatgttcagaagatgaaacaataaaattttttgatatcgaaacacaaaatgaa
ttgttttatcaagaagggcacaattctaatgtatattcagctacatttaacccatacgga
aatttatatttatcaggggatgcaaaaggtggtttaatgctatgggatattagaacagga
agaaatatcgaaagaaaacatatgattcataataattgtataatgaatataagtttcaat
ccatttatgccaaatatgttttgtacatgctcttcggataataccatcaaaatatttgat
ttaagaaatttcacagtttcctgtaatatattagcacataacaaaattgttactgatgca
atttttgaaccaacatatggcagatatatagcatcaagttcatttgatacttatataaaa
atatgggatactgtaaatttttattgtacaaaaattttatgcaataatgacaataaagtc
agaaatgtggatatatctcctgatggtaatttgatttcttgcacatcttttgataggaca
tggaaattgtacaaaatcgaagaattcgaaaaggagaatattatgtcagattttgtttaa
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