Plasmodium chabaudi: PCHAS_1369500
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Entry
PCHAS_1369500 CDS
T01108
Name
(RefSeq) U3 small nucleolar RNA-associated protein 15, putative
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
pcb
Plasmodium chabaudi
Pathway
pcb03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pcb00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PCHAS_1369500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcb03009
]
PCHAS_1369500
Ribosome biogenesis [BR:
pcb03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
PCHAS_1369500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
CPSF_A
EIF3I
Beta-prop_NUP159_NUP214
UTP15_C
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
GAS2
Motif
Other DBs
NCBI-GeneID:
3495145
NCBI-ProteinID:
XP_016654767
UniProt:
A0A4V0KCU6
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All DBs
Position
13:2526570..2528870
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AA seq
464 aa
AA seq
DB search
MSFFQPIELIRKKKTVLQDCKDYLFDFKIVKKENLNSPIKSVSIWREYAAIGCNDTVSLY
DIKGKWLQKKYSCKENISFLKFRDDKMLGVGMENGNIELIGIFFFDRIKNLKGHKSSIND
MCFSSNFQKLYSCSRDFTIKIWNILEGQCENTLDYHIDSVTSICMYKGDEDNYLISSSYD
GYIYFYNLDKNENTNKLELKSPIEYIYIYKDEYICVAVKNVIKIYSLENMNFIKDIIITT
KTIYFLNSFNKYIVAASIDASIYFIDPQIKHPEKTKVVSIFSTHQASKCISIYENTICLA
ENGGIWSIYAYCEGEKKTIKNKRKYSIINLEEEKYRFTNKNINHYIRTFKYNDALIEAIN
HESRSILSLIDYLSKQNMLLAACSTFCEERVLKILRFFKSKFVLDILMFEFFFSFLSANK
WIETSKNKQILNLFKELQFAFSRMIRITDYYKNLKEITDDLKNK
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgtcattctttcaaccgatagagctaataaggaaaaaaaaaacggtcctacaagactgt
aaagattatttatttgattttaaaattgtaaaaaaagaaaatttaaactcgccgattaaa
tcagtaagcatttggagggaatatgcagctattggctgcaatgatacggtttcattatat
gacataaagggaaaatggttgcagaaaaaatacagttgcaaagagaatattagtttttta
aaatttcgagatgataaaatgttaggagttggtatggaaaatggtaatatagaattgata
gggatatttttttttgatagaataaaaaatttgaagggacataaatcatcaattaatgat
atgtgttttagttcgaattttcaaaaattatattcatgttctcgtgattttactattaaa
atttggaacatattagaagggcaatgtgaaaatacgctagattatcatattgatagtgta
actagtatttgtatgtataaaggagatgaagataattatttaattagttcgagttatgat
ggatatatttatttttacaacttagataaaaatgaaaatacaaataaattagaattaaag
tcacctatagaatatatatatatatataaagatgaatatatatgtgttgctgtaaaaaat
gttattaaaatatattctcttgaaaatatgaactttataaaagatattataatcactaca
aaaacgatatattttttaaatagctttaataaatacattgtagcagctagtattgatgca
agtatatattttatagatcctcaaataaaacatccagagaaaacaaaagttgtaagcata
ttttcaactcatcaagcatcaaaatgtatatcaatatatgaaaatactatatgtctagca
gaaaatgggggtatctggagtatatatgcatattgtgaaggtgaaaaaaaaacgatcaag
aataaaagaaagtattctattataaatttagaggaagaaaaataccgattcacaaataaa
aatataaatcattatattagaacattcaaatacaacgacgcattaattgaagcaattaat
catgaaagtagaagcatattatcattaatagattatttatcaaaacaaaacatgttgctt
gcagcatgttctacattttgtgaagaaagagtattaaaaattttaaggtttttcaaaagc
aaatttgttttagatatattaatgtttgaattcttcttttcctttttaagtgcgaataaa
tggattgaaacttcaaaaaataaacagatcttgaatttgtttaaggaattacaatttgct
tttagtagaatgataagaataacagattattataagaacttaaaagagattactgatgat
ttaaaaaataagtaa
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