KEGG   Plasmodium chabaudi: PCHAS_1404500
Entry
PCHAS_1404500     CDS       T01108                                 
Name
(RefSeq) DNA ligase I, putative
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
pcb  Plasmodium chabaudi
Pathway
pcb03030  DNA replication
pcb03410  Base excision repair
pcb03420  Nucleotide excision repair
pcb03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pcb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PCHAS_1404500
   03410 Base excision repair
    PCHAS_1404500
   03420 Nucleotide excision repair
    PCHAS_1404500
   03430 Mismatch repair
    PCHAS_1404500
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pcb03032]
    PCHAS_1404500
   03400 DNA repair and recombination proteins [BR:pcb03400]
    PCHAS_1404500
Enzymes [BR:pcb01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     PCHAS_1404500
    6.5.1.6  DNA ligase (ATP or NAD+)
     PCHAS_1404500
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     PCHAS_1404500
DNA replication proteins [BR:pcb03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    PCHAS_1404500
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     PCHAS_1404500
DNA repair and recombination proteins [BR:pcb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     PCHAS_1404500
   NER (nucleotide excision repair)
    Other NER factors
     PCHAS_1404500
   MMR (mismatch excision repair)
    Other MMR factors
     PCHAS_1404500
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C ICE2
Other DBs
NCBI-GeneID: 3492910
NCBI-ProteinID: XP_739847
UniProt: A0A077TQB1
LinkDB
Position
14:complement(195369..198177)
AA seq 891 aa
MKLLLLVLLTKMYFCKIKRYMRTEYNYVTPFMKSKLFHNYKNKFNVIIVKNIRNNVPNRN
DKYLKCLSFPKKMEGDEQCDTKVEETHVKSEEKEVSKRKNTNDDGTKTKKPKGKNENEIK
KGSLFNCKVYEDEKISDLASPKFNPANFDISNLCLPEKDKAKHKFKDSLLFTFLTNTFNQ
IEELKGSGAGSKKNVAIILSNVFRVLIYYSPNDLIPAVYITLNKVAPDYQNVEAGVGEAL
ILKTMSEAYSRTEASIKKDLQQIEDLGIIAESCSCKMRTIFPLPRLTIQSVFNELKSIPN
ISGSNSQQKKREVIKKLLVSAKTSEAKYIVRFLQQRLRIGVNSATVLQALAYAFVLTRPE
LPENIIKEGKLMNEKLLNESVAVKGDNATEIKNENNIKSEKKNDADNKTSALDTDQFNDL
VKSIKMRNERMSKPNLFYNIGKEGDTRLLPIFKELKNAYCDVNNDSDIFECMEKSVKSAL
CELPNIEMIIQNLLNGDDMNVLMKKCTVKTGVPVQPMLAKPTKGIQEVLDRFNNVTFTCE
YKYDGERAQIHYIDKDNIKIFSRNLETMTEKYPDVIQIVKDQIMPGVTESIIDSEVVAYD
IENKKILPFQILTTRKRKDVDIENIKVKICLFPFDLICCNGVPVIKEPLEIRRKLLYSLL
KCKEGVLEYATHSEMNNIEDIDMFLQDAIENSCEGLMVKTLLDNASYEPSRRSLNWLKVK
KDYIEGLSDSVDLVPIAGYYGKGKRSGVYGAFVLAAYNSETENFQTVCKAGTGFSDEILN
ALHESLSDKIIPNKKSYYEVSDKLNPDVWFDAHYVWEIKAADLSLSPVHTAAIGVYSDDK
GIGLRFPRFLRLRDDKNPEQATTTQQIVEFYEAQFASNKNKNNYNDDSGSE
NT seq 2676 nt   +upstreamnt  +downstreamnt
atgaaattattattgctggtacttttaacaaaaatgtatttttgtaaaataaaaagatac
atgagaactgaatataattatgtaacaccatttatgaaaagcaaattatttcataattat
aaaaataagtttaatgtgataattgtaaagaatattagaaataacgtgccaaatagaaat
gataaatatttaaaatgtttatcatttcctaaaaaaatggaaggagacgagcaatgtgat
accaaagtagaagagactcatgttaaaagtgaagaaaaggaagtatcaaaaaggaagaat
acaaacgatgatggtacaaaaacaaagaaaccaaaaggaaagaatgaaaatgaaataaaa
aagggttcattatttaactgtaaagtttatgaggatgaaaaaataagtgatttagcatca
ccaaaatttaatcctgccaattttgatataagtaatttatgcttacctgaaaaggataaa
gcaaaacacaagtttaaagattccttattatttacatttcttacaaatacatttaatcaa
attgaagaattaaaaggtagtggtgcaggaagcaagaaaaatgtagctattattttatca
aacgtttttcgtgttttaatatattatagccctaatgatttaattccggcagtatatata
actttaaataaagtggcaccagattaccaaaatgtcgaagcaggggttggtgaggcatta
atattaaaaacaatgtcagaagcatatagtagaactgaagctagtataaaaaaagatttg
cagcaaattgaggatttaggaataatagcggaaagttgttcatgtaaaatgagaactata
tttcctttacctaggttaactattcaatccgtttttaatgaattaaaaagtataccaaat
attagtggctctaattctcaacagaaaaaaagagaagtaataaaaaagctattagttagt
gcaaaaacttcagaggcaaaatatatagtgcgatttttacagcaacgtttaagaattggt
gtaaatagtgctactgttttgcaagctttggcatacgcttttgtattaacgcgccctgaa
cttccagaaaatatcataaaggagggaaaattaatgaatgaaaaattgctaaatgagtca
gtagcggttaagggtgataatgccacagaaataaaaaatgaaaataatataaaatcggaa
aagaaaaatgatgcggataacaaaacaagtgcgttggacactgaccaatttaatgattta
gtaaaatcaataaagatgcgtaatgaaagaatgagtaaacccaacttgttttataacata
ggaaaagaaggagatactcgcttattgcctatatttaaagaattaaaaaatgcatattgt
gatgtaaataatgattcagatatttttgaatgtatggaaaaatctgtaaaaagtgcttta
tgtgaattaccaaatattgaaatgattatacaaaacttattaaatggtgatgatatgaat
gtgttaatgaaaaaatgtactgttaaaaccggagttccagtgcagcctatgttagctaag
ccaacaaaaggaatacaagaagttttagatagatttaataatgttacatttacatgtgaa
tataaatatgacggtgaaagagcccaaattcattatattgataaagataatataaagatt
tttagtagaaatttagaaacaatgacagagaaataccctgatgttattcaaattgtaaaa
gatcaaataatgcctggtgttactgaatctattattgatagtgaagttgtagcatatgat
attgagaataaaaaaatattaccgtttcaaatattaacaacacgaaaaagaaaggatgta
gatatagaaaacataaaagtgaaaatatgcttgtttccatttgatttaatatgttgcaat
ggggtacctgtaataaaagaaccattagaaattagaaggaagttattatattctttatta
aaatgtaaagaaggagtgctagaatatgcaacacattcagaaatgaataatattgaagat
atagatatgtttttacaagatgctattgaaaatagttgtgaaggtttaatggttaaaact
ttactcgacaatgcttcttatgagccatcaagacgatcattaaactggttaaaggtgaaa
aaagattacatagaaggattatcagactcagttgatttagtgcctatagctggatattat
ggaaaaggaaaaagaagtggggtttatggtgcttttgttttagctgcatataattctgaa
acagaaaacttccagacagtatgtaaagcaggtaccggttttagtgatgaaattttgaat
gcattacatgaatctttaagtgataaaattatacctaataaaaaatcatattatgaagta
tcagataaactaaaccctgatgtatggtttgatgctcattatgtatgggaaattaaagca
gcagatttatctttatcgcctgtccatactgcagctatcggagtatattcagatgataaa
ggaattgggttaagattcccaaggtttcttagattgagggatgataaaaatccagaacaa
gcaaccacaactcagcagattgtcgaattttacgaagctcaatttgcttcgaacaaaaat
aaaaataattataatgacgatagtggaagtgaataa

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