Plasmodium chabaudi: PCHAS_1405300
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Entry
PCHAS_1405300 CDS
T01108
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB11, putative
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
pcb
Plasmodium chabaudi
Pathway
pcb03020
RNA polymerase
pcb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pcb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PCHAS_1405300
09124 Replication and repair
03420 Nucleotide excision repair
PCHAS_1405300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcb03021
]
PCHAS_1405300
03400 DNA repair and recombination proteins [BR:
pcb03400
]
PCHAS_1405300
Transcription machinery [BR:
pcb03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
PCHAS_1405300
DNA repair and recombination proteins [BR:
pcb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
PCHAS_1405300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
Thermo-DBP
Motif
Other DBs
NCBI-GeneID:
3496824
NCBI-ProteinID:
XP_743717
UniProt:
Q4XS21
LinkDB
All DBs
Position
14:224723..225732
Genome browser
AA seq
126 aa
AA seq
DB search
MSVPTLSNKPENVDLLVLPHGEEKVKCQISDKGDCNIFTIKLEDHTIGNLIKQSLCQDPK
VTFAAYRQPHPLQNAIEITIRPKGYAGVKLLSDNVHSILNQVSTLRETFANRVQKYKEKN
AYHGNR
NT seq
381 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtaccaacattatccaataaaccagaaaacgttgatttgcttgttctacctcac
ggagaagaaaaagttaaatgccaaatatcagataaaggagactgcaacatatttacaatt
aaattagaagatcatacaataggaaatttaataaaacaatccctttgtcaagaccctaaa
gtcacattcgctgcatatagacaacctcaccctttgcaaaatgcaattgaaataactata
agaccgaaaggatatgctggtgtaaaattactttcagataatgttcacagcatattaaat
caagtgtccactttacgggagacgtttgcaaatagagttcagaaatataaggaaaaaaat
gcatatcatggaaatcgctaa
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