Plasmodium chabaudi: PCHAS_1428700
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Entry
PCHAS_1428700 CDS
T01108
Name
(RefSeq) ATP-dependent RNA helicase DBP1, putative
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
pcb
Plasmodium chabaudi
Brite
KEGG Orthology (KO) [BR:
pcb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcb03019
]
PCHAS_1428700
03041 Spliceosome [BR:
pcb03041
]
PCHAS_1428700
03036 Chromosome and associated proteins [BR:
pcb03036
]
PCHAS_1428700
Enzymes [BR:
pcb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PCHAS_1428700
Messenger RNA biogenesis [BR:
pcb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
PCHAS_1428700
mRNA cycle factors
Common to processing body (P body) and stress granule
PCHAS_1428700
Spliceosome [BR:
pcb03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
PCHAS_1428700
Chromosome and associated proteins [BR:
pcb03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
PCHAS_1428700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Utp25_C
Motif
Other DBs
NCBI-GeneID:
3488203
NCBI-ProteinID:
XP_735210
UniProt:
A0A077TR12
LinkDB
All DBs
Position
14:complement(1041961..1044657)
Genome browser
AA seq
898 aa
AA seq
DB search
MNYNNNISNGTFRKSDDDRNNYVRSNNYESNTNEDQGFSKKECIDIEESSNTQGYNHIRN
KREVDNNMMANAYDGNMENECYGMNDNNNPNNRNRVNDGRNRSGNNPANGNQESYKKKFG
NKNFNNENGNQKNKIGMQNQQKKSGGLNHFMGNNLEKNKMRIGSIPHNTMPGNNNNDMNN
EEDAYKNNDNNHSGANNSGNNNFKGDKLKYKPPMLRNQGGMNRNNFNRMNYNKNSGNNGE
GGGRGHFGFNNRHYNIPKTAWANRDNRRYYPEKEDEIYSNVKIEKGVNFELYDTIPVEIK
GYNSDNIIPIESFTDSYLNLNELLLSNIKKVHYDKTTPIQKYSLSIIMNKHDLIGVAQTG
SGKTAGYLLPIINHMLLNDPPKHTFYEENNKNSNYYYNRVCLPICLILAPTRELAVQIFY
DSKKFCFETGIKSVVLYGGSNIKTQLSNLDKGADIIVATPGRLNDILEKGKIRLFLTSFL
VLDEADRMLDMGFSPQIKSIVNDYDMPGNDNDSYMGENKMEYKKYTNEIVKRQTIMFSAT
FRKEIQVLAKDYLCNYTFLLVGKVGSTNEYIKQNLVYSEEENKCSFLLKLLSENSNGLTI
IFVETKRKADIIERFLNNQKLNAVCIHGDKSQDERERALELFKRGVKNILVATDVAARGL
DISNIKHVINFDLPSNIDDYIHRIGRTGRAGNIGIATSFVNDDNKNIFKDLLATLEECNQ
EIPRWFLNLVMRHTASAKSNRNYNKYRSMRGGKGNFGRYNNNNNGGDFNTGRYNNSGYNN
FNHNFNQNQNFNYNNANMNNENNSPFNNNNSYNQYSAFNANNSYSNKNHMNGNNDGDFSN
NRIYPNNNNHNNAFNNYSGNANPFNNQKFNNYNKRFDDQKFQRGSFPVADDNNNNDGW
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgaattacaataataatataagtaatggcacttttagaaaaagtgatgatgacagaaat
aattatgtaaggagcaataattacgaaagtaatacgaacgaagatcaaggatttagtaag
aaagaatgcatagatatagaagaaagttcaaacacacagggatataaccatataaggaat
aaaagagaagtagataataatatgatggcgaatgcatatgatggaaatatggaaaatgaa
tgttacggaatgaacgataataataacccaaataatcgaaacagagttaatgatggaagg
aatagaagtggtaataaccctgccaatggaaatcaggaaagttataaaaagaaatttgga
aataaaaattttaataatgaaaatggaaaccaaaaaaataaaattggtatgcagaatcag
cagaagaaatctggaggccttaatcattttatggggaataacttagaaaaaaataaaatg
agaattgggtccattcctcataatacaatgccaggaaacaataataatgatatgaataat
gaagaagatgcatacaaaaataatgataataatcattctggtgctaacaatagtggaaat
aataacttcaaaggtgataaactaaagtataagccacctatgctaagaaatcaaggagga
atgaatagaaataatttcaacaggatgaattacaacaagaattcaggaaataacggcgaa
ggaggtggaagaggacatttcggatttaataacaggcattataacatccccaaaactgct
tgggctaatagagataatagaagatattatccagaaaaagaagatgagatatattcaaat
gtgaaaattgaaaaaggtgttaattttgaattatatgatactataccagtcgaaataaag
ggatacaatagtgataatataataccaatcgaatcatttacagattcttatttaaatttg
aatgaattgttattatctaatattaaaaaggtacactatgacaaaacaacacctattcaa
aagtatagtttaagcataattatgaataaacatgatttaataggtgttgctcaaacaggt
agtggtaaaactgctggatatttattgcccatcattaatcatatgttattaaatgaccct
cctaagcatacattttacgaagagaataataagaattctaattactattataatagagtg
tgtttacccatatgtttaatattggcacctacgagagaattagctgtacaaatattttat
gattctaaaaaattttgttttgaaacaggaataaaatcagttgtattatatggtggtagt
aatattaaaacacaattatctaatttagataaaggagctgatattatagttgcaacacca
ggtcgattaaatgacattttagaaaaagggaaaatacgattattccttacatcattttta
gtattagatgaagctgacagaatgctagatatgggtttttctccacaaattaaaagtata
gtcaatgattatgatatgccaggaaatgataatgattcatatatgggtgaaaataaaatg
gagtacaaaaaatatactaatgagatagtaaaaaggcagacaattatgtttagtgcaaca
ttcagaaaagaaattcaagtgttagctaaagactatctatgcaattatacatttttacta
gtaggaaaagttggaagtactaatgaatatattaagcaaaatctcgtatatagtgaagaa
gaaaacaaatgtagttttctacttaaattgctgtcagaaaatagtaatggcttaacaatt
atattcgttgaaacgaaaagaaaggcagatattattgaaagatttttaaataaccaaaaa
ttaaatgccgtttgtatacacggagataaaagtcaagacgaaagagaaagagctttggag
ttatttaaaagaggagttaaaaatatattagtagcaacagatgtagctgctagaggtctc
gatatatctaatattaagcatgtaataaattttgaccttccaagcaatatagatgattat
attcatagaattggtagaacaggtagagctggaaatataggtatagcaacgtcatttgta
aatgatgacaacaaaaatattttcaaggatttgttagccaccttagaagaatgcaatcaa
gaaataccacgttggtttttaaatttagtaatgaggcatacagctagtgcaaagtcaaat
agaaattataataaatatagatctatgagaggaggaaagggaaatttcggccgatacaac
aataacaataatggaggcgatttcaacactggaagatacaacaatagcggctataataat
tttaaccacaactttaatcaaaaccagaattttaattataataatgctaacatgaacaat
gaaaataacagcccatttaataataacaattcttataatcaatattcagcatttaatgct
aataattcatatagtaataaaaatcatatgaatggaaataatgatggggatttttcaaat
aatcgcatatacccaaataataacaatcataacaatgcatttaataactattctggtaat
gcaaacccatttaacaatcaaaaattcaacaattataacaaaagatttgatgatcaaaaa
tttcaaagaggaagttttccagttgccgacgacaataataacaatgacggatggtga
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