Plasmodium chabaudi: PCHAS_1437300
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Entry
PCHAS_1437300 CDS
T01108
Name
(RefSeq) pre-mRNA-processing factor 17, putative
KO
K12816
pre-mRNA-processing factor 17
Organism
pcb
Plasmodium chabaudi
Pathway
pcb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PCHAS_1437300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcb03041
]
PCHAS_1437300
Spliceosome [BR:
pcb03041
]
Complex C
Other components
Step II factors
PCHAS_1437300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
WDR54
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
3497127
NCBI-ProteinID:
XP_744016
UniProt:
A0A4V0KDU0
LinkDB
All DBs
Position
14:1329020..1330903
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AA seq
627 aa
AA seq
DB search
MDLLKEYDENDDLEVDDSNDKNSNEKESSNNSGTKTTDPICDENNASIKNEGNENTQIVN
ISSMGLINCAPDVNTYDMEIKNYREKFKNMEKKIMFDDPVYHSIMSKPQQGPSINGHYNF
LKNANKNHFNGNIETTFVNKNMFDYQYNHFNVTGIAQNPALKNYYQNNYQNYIIATNPIS
YSENIGQLQVNQSRKKRGKSESNDYYSLEKYKGPWESRENNNNKEKENGDEQTGDNKKHK
NDKNDDDVDESKKNNSKKNVFLKLEPCGLEEAIQNNTISEQNTLYNDKIVSTLHINYEVD
DYYKKSWFELPSEYKEKDFIIEENFPPKKEIHTYKGHKMGVQKIRFFPKYGNYILSASLD
STLKLWSSYKSKNCVRTYKGHFKGVKDVLFDKDGSNFISCSYDNNVIYWDTEYGKIKGIY
SQKKTPYCLCLNDDDPNIFLVGGANNKICHIDFRTGNVELEYNEHLQAINTITLCENNKK
LVSTSDDKKIFIWEYGLPVVVKYISDASMFSITSVSVHPSNKFFLCQSMNNMITVYEATG
KFRFFSKKTFKGHKNIGYSINVSCSNDGKYVISGDSNGGLFIWNWKKMSNFKNIKAHSNV
CIDCAWHPFKTSMLATASWDSTIKLWE
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggatttgttgaaagagtatgatgaaaatgatgatctggaagtagatgattctaatgat
aaaaactcaaacgagaaagagagttcaaataatagtggcactaaaacaacggaccctata
tgtgatgaaaacaatgcaagtataaaaaatgaggggaatgaaaatacccaaatagtaaat
ataagttcaatgggtttaataaattgtgcccctgatgtaaatacctatgatatggaaata
aaaaattatagagaaaaatttaagaatatggaaaaaaaaattatgtttgatgacccagtt
taccatagcattatgagcaaaccacagcaagggccaagtataaatggacactacaatttc
ttaaaaaatgccaataaaaaccattttaatggaaacatagaaacaacatttgttaataaa
aatatgtttgattaccaatataatcattttaatgtaactggcattgctcaaaaccccgca
ttaaaaaattattaccaaaataattatcaaaattatataatagcaacaaatccaattagt
tattctgaaaacattggacagttacaagtaaatcaaagtcgaaaaaaaagaggaaaaagt
gaaagtaatgattattattccctggaaaaatataaaggcccatgggaatctagagaaaat
aataataacaaagaaaaagaaaacggagacgaacaaacaggtgacaataaaaaacataaa
aatgataaaaatgatgacgatgtagatgaatctaaaaaaaacaattcaaaaaaaaatgta
ttcttaaaattggaaccgtgtggacttgaagaagcaattcaaaataatacaataagcgaa
caaaatacattatataatgataaaattgtttcaacattacatataaattatgaagttgat
gattattataaaaaatcatggtttgaattgccatcagaatataaagaaaaagattttata
atagaagaaaattttccccccaaaaaagaaattcatacatataaggggcataaaatggga
gttcaaaaaattcgttttttcccaaaatatggaaattatattttatctgcttccttagat
agtacattaaaattgtggagctcatataaatcaaaaaattgcgtaagaacatacaaaggg
catttcaaaggagttaaggatgtattatttgataaagatgggtcaaattttataagttgc
agctatgataataatgttatttactgggacacagaatatggaaaaataaaaggaatatat
agtcagaaaaaaacaccatattgtttgtgcttaaatgatgatgatccaaatatcttttta
gtaggtggtgctaataataaaatttgtcatattgattttagaacaggtaatgtagaatta
gaatataatgaacatttacaagctataaatacaattactttatgtgaaaataataaaaaa
cttgtcagtacatcagatgataaaaaaatatttatttgggaatacgggttaccagttgtt
gttaaatatatttctgatgcttccatgttttcaataacatccgtttctgttcatccaagt
aacaaattttttttatgtcaatcgatgaataatatgataactgtttatgaagcaacagga
aaatttagattcttttcgaagaaaacatttaaaggacataaaaatattggatattctatc
aatgtatcatgtagtaatgatgggaaatatgttatcagtggtgatagtaatggaggctta
tttatatggaactggaaaaaaatgtctaactttaaaaatataaaagcacatagtaatgtc
tgtatagactgtgcatggcatcctttcaaaacctcaatgttagctacagctagctgggac
tcaacaattaaattatgggaataa
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