Pectobacterium carotovorum subsp. carotovorum PCC21: PCC21_001540
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Entry
PCC21_001540 CDS
T02320
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
pcc
Pectobacterium carotovorum subsp. carotovorum PCC21
Pathway
pcc00541
Biosynthesis of various nucleotide sugars
pcc01100
Metabolic pathways
pcc01250
Biosynthesis of nucleotide sugars
Module
pcc_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
pcc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
PCC21_001540
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pcc01005
]
PCC21_001540
Enzymes [BR:
pcc01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
PCC21_001540
Lipopolysaccharide biosynthesis proteins [BR:
pcc01005
]
Core region
PCC21_001540
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
Motif
Other DBs
NCBI-ProteinID:
AFR01557
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All DBs
Position
complement(165065..165997)
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AA seq
310 aa
AA seq
DB search
MIIVTGGAGFIGSNIVKSLNDIGYRDILVVDNLKDGTKFANLVDLDIADYVDKEDFIASI
VAGDDLGDIDAVFHEGACSSTTEWDGKYMMDNNYQYSKDVLHYCLDRNIPFLYASSAATY
GGRNDNFIEERQYEQPLNVYGYSKFLFDQYVREILPEAESQICGFRYFNVYGPREGHKGS
MASVAFHLNNQINQGENPKLFSGSENFQRDFIYVGDVAAVNLWFWQNGVSGIFNCGTGRA
ESFQAVADATLAFHKKGSVEYIEFPEKLKGRYQAYTQADLTNLRAAGYDKPFKTVAEGVA
EYMAWLNRTV
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgattatcgttactggcggtgccggttttatcggcagcaatatcgtaaaatctctgaat
gacatcggctatcgggacattctggttgtcgataacctgaaagacggcaccaagttcgcc
aatctggtcgatctggacatcgcagattacgtggataaagaagatttcatcgccagcatt
gttgcaggcgacgatctgggcgatatcgatgccgtattccatgaaggcgcttgctcttcc
accaccgagtgggatggcaaatacatgatggataacaactatcagtattccaaagacgtg
ctgcactactgcctcgatcgcaacattccgttcctgtatgcctcttctgccgcgacctac
ggcggtcgcaacgataactttatcgaagagcgtcaatacgagcagccgctgaacgtctat
ggctactccaaattcctgttcgaccagtacgtgcgtgaaattcttccagaagctgaatcg
cagatctgcggtttccgctatttcaacgtctacggaccgcgcgaaggtcacaaaggcagc
atggcgagcgtcgcattccacctgaataaccagattaatcagggtgaaaatccgaagctg
ttctccggtagtgagaacttccaacgtgacttcatctacgtcggtgatgtcgcggccgtc
aacctgtggttctggcaaaacggtgtttccggcatcttcaactgcggtactggtcgcgcc
gaatccttccaggctgtcgcggacgccaccctcgccttccataaaaaaggcagcgtggaa
tacatcgagttccctgagaagctgaaaggccgctatcaggcttatacacaagccgacctc
accaatttgcgtgccgctggctatgacaagccgttcaaaaccgtcgccgaaggcgtggcg
gaatatatggcctggctgaaccgtaccgtttaa
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