Pectobacterium carotovorum subsp. carotovorum PCC21: PCC21_001940
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Entry
PCC21_001940 CDS
T02320
Name
(GenBank) fatty acid oxidation complex alpha subunit FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pcc
Pectobacterium carotovorum subsp. carotovorum PCC21
Pathway
pcc00071
Fatty acid degradation
pcc00280
Valine, leucine and isoleucine degradation
pcc00310
Lysine degradation
pcc00362
Benzoate degradation
pcc00380
Tryptophan metabolism
pcc00410
beta-Alanine metabolism
pcc00640
Propanoate metabolism
pcc00650
Butanoate metabolism
pcc00907
Pinene, camphor and geraniol degradation
pcc00930
Caprolactam degradation
pcc01100
Metabolic pathways
pcc01110
Biosynthesis of secondary metabolites
pcc01120
Microbial metabolism in diverse environments
pcc01200
Carbon metabolism
pcc01212
Fatty acid metabolism
Module
pcc_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
pcc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
PCC21_001940
00650 Butanoate metabolism
PCC21_001940
09103 Lipid metabolism
00071 Fatty acid degradation
PCC21_001940
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
PCC21_001940
00310 Lysine degradation
PCC21_001940
00380 Tryptophan metabolism
PCC21_001940
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
PCC21_001940
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
PCC21_001940
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
PCC21_001940
00930 Caprolactam degradation
PCC21_001940
Enzymes [BR:
pcc01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
PCC21_001940
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
PCC21_001940
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
PCC21_001940
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
PCC21_001940
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Osmo_MPGsynth
Motif
Other DBs
NCBI-ProteinID:
AFR01597
LinkDB
All DBs
Position
complement(211165..213354)
Genome browser
AA seq
729 aa
AA seq
DB search
MLYQGESLYLNWLEDGIAELVFSAPGSVNKLDTRTVASLGKALDVLAEQPNLKGLLLRSD
KPAFIVGADITEFLSLFAAPAEKLHEWLVFANNIFSRLEDLPVPTLSAINSYALGGGCEC
VLATDFRLATTDARIGLPETKLGIMPGFGGTVRLPRLLGADSALEIIAAGKDIGATDALK
VGLVQAVVANDKLVPAAIKMLKQAINGSLDWQAYRRPKLEALKLNKVEAMMSFTTAKAMV
LQTAGKHYPAPMLAVKTIEAAATMTRDDALQLETQHFVQLARSNEARALVGIFLNDQYVK
GKAKKLVGETSVPKQAAVLGAGIMGGGIAYQSAFKGVPIRMKDINEKPLALGMNEAAKLL
NKQMERGKLDGMKMATILASIQPTLDYVGFERTDIVVEAVVENPKIKANVLAETESHVSE
NTILASNTSTIPIASLAASLKRPQNFCGMHFFNPVHRMPLVEIIRGPQTSDRTIASVVAY
ASKMGKTPIVVNDCPGFFVNRVLFPYFAAFSLLLRDGADFRDIDNVMEKKFGWPMGPAYL
LDVVGIDTAHHAQAVMAEGFPQRMAKDYRDAIDVLFEHQRFGQKNGHGFYRYQTDSKGKL
RKEQDEAVDAILQDISQPKKTFSAEEIIARMMIPMINEVARCLEEGIVASPAEADMALVY
GLGFPPFHGGACRYLDTLGSERYVEMAQQLAHLGAIYQVPDGLQQKAKSNEGYYPSVAPH
ADVSYGQPA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgctttatcaaggtgaatccctctaccttaactggcttgaggacggcattgccgagctg
gtattttctgcccctggctccgtaaacaagctagatacccgcacggttgccagcctgggt
aaagcgctggacgttctggcggaacagccgaatctgaagggcttactgctacgttctgac
aaaccggcatttattgtcggtgccgatatcacagaattcctttctctttttgccgcaccg
gccgaaaagctgcatgaatggcttgtcttcgccaacaacattttcagccgccttgaggat
ctgcccgttcccacgctgtccgcgattaatagctatgcgttgggcggcgggtgtgaatgt
gtgctggcaaccgattttaggttggcaacgacggatgcccgcatcgggctgcctgagacc
aaactggggatcatgccgggctttggcggtacagtcaggctaccacgcctgctgggcgcg
gacagcgcgctggagattatcgccgcaggcaaagacatcggcgcaaccgatgctttaaaa
gtggggctggtgcaagccgttgtcgccaatgacaagctggttcccgccgccatcaagatg
ttgaaacaggcgattaatggctcactggactggcaggcttaccgacgtccgaaacttgaa
gcgctgaagctcaataaggtcgaagccatgatgagctttaccaccgccaaagcgatggtg
ctacaaactgcgggcaagcactatccggcaccgatgctggcggtaaaaaccatcgaagcc
gccgcgaccatgacacgcgatgacgcattgcagcttgagacgcagcacttcgttcaactg
gcacgttcaaatgaagctcgtgcactcgtcggcattttcctcaacgatcaatatgttaaa
ggcaaagcgaagaagctggttggcgagacatccgtaccgaagcaggccgccgtgctaggg
gcaggcattatgggcggcggcattgcctatcaatctgcgttcaaaggcgtgccgattcgg
atgaaagatatcaacgagaagccgctcgcgctggggatgaatgaagcagccaagctcctg
aataagcagatggaacgaggcaagctggacggaatgaaaatggcgacgattctggccagt
attcagccaacgctggattacgtcggattcgagcgcaccgacatcgtggttgaggctgtg
gttgagaacccgaaaatcaaagccaacgtgttggcagaaaccgaatcgcacgtgagtgag
aatacgattctggcttcgaatacctcaacgatcccgattgcttcactggctgcgtcgcta
aaacgaccgcaaaacttctgtggtatgcacttcttcaacccggtacaccgcatgccactg
gtcgaaattattcgcggccctcaaaccagcgacagaaccatcgccagcgtggtggcttac
gccagcaagatgggcaaaacgccaattgtcgtgaacgactgccctggattcttcgtgaat
cgggtgctgttcccctattttgctgcgttcagcctattgctcagagacggtgctgatttc
cgcgatattgataacgtcatggagaaaaagttcggttggccgatgggcccggcctatctg
ctggacgttgtcggtattgataccgctcaccatgctcaggctgtgatggctgagggcttc
ccacagcgcatggcgaaagactatcgcgatgcgattgatgtgctatttgaacaccagcgt
ttcgggcagaagaatggtcacggcttctaccgttatcaaaccgatagtaaggggaagctg
cgtaaagaacaggatgaagctgtagatgcgatccttcaggacatcagccagccgaaaaaa
acgttcagcgcagaagagattatcgcgcgcatgatgatcccaatgattaatgaagtcgct
cgctgtctggaagaaggtatcgtcgccagccccgccgaagcagacatggcgctggtatat
gggttaggtttccctcccttccacggcggagcctgccgctatctggatacattaggtagc
gaacgttatgtcgagatggcgcaacagctggcacacctcggtgccatctatcaggtgcct
gacggcttgcagcaaaaagccaaaagcaatgaaggctattatccgtcggtcgcgccacac
gcggacgtttcttacggtcaaccggcatga
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