Pectobacterium carotovorum subsp. carotovorum PCC21: PCC21_002220
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Entry
PCC21_002220 CDS
T02320
Name
(GenBank) thiamine biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
pcc
Pectobacterium carotovorum subsp. carotovorum PCC21
Pathway
pcc00730
Thiamine metabolism
pcc01100
Metabolic pathways
pcc01240
Biosynthesis of cofactors
Module
pcc_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
pcc00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
PCC21_002220
Enzymes [BR:
pcc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
PCC21_002220
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AFR01625
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All DBs
Position
complement(248927..250882)
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AA seq
651 aa
AA seq
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MSTEPLSIQTVSSKSGRREQRAAAQQFIETLQGTAFPNSKRIYLAGSRDDIHVPMREIQL
SPTLLGGSKDNPQYEPNEPIPVYDTSGPYGDPAAQPDVRVGLAKLRAGWIAERHDTEALS
GVSSDFTQQRLADAGLDHLRFEHLPRPLRAKAGKRVTQLHYARQGIITPEMEFIAIRENM
GRERIRGEVLRQQHPGQSFGALLPENITPEFVRQEVAAGRAIIPSNINHPESEPMIIGRN
FLVKVNANIGNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWILRNSPVPI
GTVPIYQALEKVNGVAENLNWEMFRDTLLEQAEQGVDYFTIHAGVLLRYVPMTAKRLTGI
VSRGGSIMAKWCLSHHKESFLYEHFREICEICAAYDVALSLGDGLRPGSIQDANDEAQFA
ELHTLGELTKIAWEYDVQVMIEGPGHVPMQMIRRNMTEELEHCHEAPFYTLGPLTTDIAP
GYDHFTSGIGAAMIGWFGCAMLCYVTPKEHLGLPNKEDVKQGLITYKIAAHAADLAKGHP
GAQIRDNAMSKARFEFRWEDQFNLALDPQTARAYHDETLPQESGKVAHFCSMCGPKFCSM
KISQEVRDYAAKQEAEAKPIEVGMAQMSQEFRSRGSELYHSATSLQTEESK
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgtctacagaacccttgtctatacaaacagtgtcgtcaaaatcgggtcgccgtgaacag
cgtgccgccgcccagcagtttattgaaaccttacagggaaccgcctttcccaactccaaa
cgcatttaccttgcgggttcgcgtgacgacatccacgtgccaatgcgggagattcagctt
agcccgacgttactcggcggcagtaaagacaatccccaatacgagcccaatgaaccgatc
ccggtttacgatacgtcagggccttatggcgatcctgctgcgcaacccgatgtccgcgtt
gggctagcgaagctgcgcgccggttggattgcagaacgccacgacaccgaggcgctatcc
ggcgtcagctccgatttcacccagcagcgtctggcggatgccggtctggatcatctgcgt
ttcgaacatttgccacgacctttacgtgccaaagcaggcaaacgcgtcacacagctccac
tatgcccgacaggggatcattacccccgaaatggaatttatcgccattcgcgaaaatatg
ggacgcgagcgcattcgcggtgaggtgctgcgccagcagcatcccgggcaaagtttcggt
gccctactgccggagaacatcacgccggaatttgtccgtcaggaagtggccgccggtcgc
gccattatcccttccaacatcaaccacccggaatcagagccgatgattatcggtcgcaat
tttctggtgaaagttaacgccaatatcggcaactccgccgtgacttcctccatcgaagaa
gaggtggaaaagctggtctggtctacccgttggggcgcagatacggtgatggatctctca
accggtcgctatattcacgaaacccgcgagtggattctgcgtaacagccccgtgccaatc
gggacggtaccgatttatcaggcgctagagaaagtgaacggcgtggcggaaaacctgaac
tgggaaatgttccgcgatacgctgctggaacaggcggaacaaggcgtggactatttcacc
atccacgcgggtgtcctgctacgctacgtgccgatgaccgccaaacgcctgaccggcatc
gtctcacgcggcggttccattatggcgaagtggtgcctgtcgcatcacaaagagagcttc
ctgtacgaacacttccgtgaaatctgtgaaatttgtgccgcttatgacgtcgcgctgtcg
ctgggtgacggcttacgtcccggttccattcaggacgccaacgacgaagcccagtttgcc
gagctgcatacgctgggcgagctgaccaaaatcgcttgggaatacgacgttcaggtaatg
atcgaaggccccgggcacgttccgatgcagatgatccgccgcaacatgaccgaagagctg
gagcactgccacgaagcgccattctatacgctcggtccgctaactaccgatatcgcaccg
ggttacgatcatttcacctccggcatcggtgcagccatgatcggctggttcggctgcgcg
atgctctgctacgtgacgccgaaggaacatcttggcttgccgaacaaagaagacgtcaaa
caggggctgattacctataagatcgccgcccacgccgccgatttggcgaaaggccatcct
ggcgcgcagatccgtgataacgccatgtcaaaagcgcgcttcgaattccgctgggaagac
cagtttaatctggcactcgatccccaaacggcccgcgcctaccacgatgaaaccctgccg
caggaatccggtaaagtcgcccacttctgctctatgtgcggtcctaaattctgctcgatg
aaaatctcacaggaagtacgcgactacgccgcaaaacaggaagcggaagccaaaccgatt
gaagtgggtatggcgcagatgtcgcaagaattccgttctcgcggcagcgagctttatcac
agcgccaccagcctgcaaaccgaggagagcaaatga
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