Pectobacterium carotovorum subsp. carotovorum PCC21: PCC21_005270
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Entry
PCC21_005270 CDS
T02320
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pcc
Pectobacterium carotovorum subsp. carotovorum PCC21
Pathway
pcc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PCC21_005270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcc03019
]
PCC21_005270
03110 Chaperones and folding catalysts [BR:
pcc03110
]
PCC21_005270
03029 Mitochondrial biogenesis [BR:
pcc03029
]
PCC21_005270
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcc04147
]
PCC21_005270
Enzymes [BR:
pcc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
PCC21_005270
Messenger RNA biogenesis [BR:
pcc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
PCC21_005270
Chaperones and folding catalysts [BR:
pcc03110
]
Heat shock proteins
HSP60 / Chaperonin
PCC21_005270
Mitochondrial biogenesis [BR:
pcc03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
PCC21_005270
Exosome [BR:
pcc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PCC21_005270
Exosomal proteins of other body fluids (saliva and urine)
PCC21_005270
Exosomal proteins of breast cancer cells
PCC21_005270
Exosomal proteins of colorectal cancer cells
PCC21_005270
Exosomal proteins of bladder cancer cells
PCC21_005270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AFR01930
LinkDB
All DBs
Position
590591..592237
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGI
DKAVIAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKMIAEAMDKVGKEGVITVEEG
TGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAV
AKAGKPLVIVAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTV
ISEEIGLELEKATLEDLGQAKRVVINKDTTTIIDGTGEEAAIQGRVAQIRQQVEEATSDY
DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALAATRAAVEEGVVAGGGVALV
RVAAKLASLTAQNEDQNVGIKVALRAMEAPLRQIVSNAGEEPSVVANSVKAGEGNYGYNA
ATEEYGNMIDFGILDPTKVTRSALQFAASVAGLMITTECMVTDLPKSDAPDLGGAGGMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagacgtaaaattcggtaatgacgctcgcgtgaaaatgctgcgcggcgta
aatgtactggctgatgcagtgaaggttaccctgggcccgaaaggccgtaatgtcgtgttg
gataaatccttcggtgcaccgaccattactaaagacggcgtatctgttgcgcgtgaaatc
gagctggaagacaagttcgagaacatgggcgcacagatggtgaaagaagttgcctctaaa
gcgaatgacgcagcaggcgacggcaccacgaccgcaaccgtattggcgcaggctatcatc
actgaaggcctgaaagctgttgcagcgggcatgaacccgatggatctgaagcgcggtatc
gataaagccgttatcgccgctgttgaagagctgaaagcactgtctgtaccgtgctctgac
tctaaagctatcgctcaggttggtaccatctctgctaactccgacgaaaccgtaggcaaa
atgattgccgaagctatggacaaagtcggtaaagaaggtgtgatcaccgttgaagaaggt
accggtctgcaagacgagctggacgtggttgaaggtatgcagtttgaccgtggctacctg
tctccgtacttcatcaacaagccggaaaccggtgctgtagaactggaaagcccgttcatc
ctgctggctgacaaaaaaatctccaacattcgcgaaatgctgccagtactggaagccgta
gcgaaagccggcaaaccgctggttatcgttgctgaagatgttgaaggcgaagcgctggca
acgctggtggttaacaccatgcgtggcatcgtgaaagttgctgcggtgaaagcgccgggc
ttcggcgaccgtcgtaaagcaatgctgcaagatatcgcgacgctgactggcggtaccgtt
atctctgaagagatcggtctggagctggaaaaagcgacgctggaagatctgggtcaggca
aaacgcgttgtgatcaacaaagacaccactaccatcatcgacggtacgggtgaagaagct
gcgatccagggccgtgttgctcagatccgtcagcaggttgaagaagcaacgtctgattac
gacaaagaaaaactgcaagagcgtgtggctaaactggctggcggcgtagccgttatcaaa
gttggcgcagcaactgaagttgaaatgaaagagaagaaagcacgcgttgaagatgccctg
gctgcgactcgcgccgcggtagaagaaggcgtggttgcgggtggtggtgttgcgctggtt
cgcgttgcagctaaactggcttctctgactgctcaaaacgaagaccagaacgtgggtatc
aaagttgcgctgcgcgcgatggaagctccactgcgtcagatcgtttccaacgctggcgaa
gagccatctgtggttgcgaacagcgttaaagcaggcgaaggtaactacggttacaacgca
gcaactgaagaatacggcaacatgatcgacttcggtatcctggatccaaccaaagtcaca
cgttctgcgctgcagttcgcggcttccgttgctggtctgatgatcaccaccgaatgtatg
gttaccgacctgccgaaaagcgatgcacctgacttaggtggcgctggtggtatgggcggc
atgggtggtatgggcggcatgatgtaa
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