Pectobacterium carotovorum subsp. carotovorum PCC21: PCC21_007150
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Entry
PCC21_007150 CDS
T02320
Name
(GenBank) Rhamnogalacturonate lyase
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
pcc
Pectobacterium carotovorum subsp. carotovorum PCC21
Brite
KEGG Orthology (KO) [BR:
pcc00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
PCC21_007150
Enzymes [BR:
pcc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
PCC21_007150
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GFIT
Motif
Pfam:
CBM-like
fn3_3
Rhamnogal_lyase
CarboxypepD_reg
RhgB_N
CarbopepD_reg_2
SdrD_B
BPA_C
Motif
Other DBs
NCBI-ProteinID:
AFR02118
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Position
809115..810845
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AA seq
576 aa
AA seq
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MKRSVLLLVGAMLAPYSYSAQDNAVSLSVSGLNTVLDNGLLKVAFGEDGSAVSMVTGGKN
IVTNLSGAARDPSKTRSAYLDYYINDAHAKGVKDFVPERVEVLRNDREMAHVAYIDDRDG
LLRLEYHLIMRRGVSGLYSYVVAENSGTQDVKVSELRNVYRFDPARLDHLYNGDRQGKPL
LYSQLEASPKVQDETWRLPDGSIYSKYDFAGYMRAAPFWGVFGNGVGAWLIHGNREYFSG
DALKQDLLVHQDAIILNYMTGSHFGTPDMVAPPGWKKFYGPWLLYINQGDTGHMLADVQR
QALTEAVSWPYNWVDDSRYARERTQVSGRVASQQPVTVVLSSSLDEPFDVQTRGYSYQAT
TDAQGNFALSHVRPGNYHLAVYANSGTQPGIFAEQTLSVSGDKQVLPVIALPKAEPVVWA
IGQANRQASEFRFGNEARNTRWQHEVPANLTFDIGRSDYQRDWYYAQTKPGKWDIRFALQ
PEKKTYFLNIALAAASNSGMSEPTMPQLAVAVNGTTLETLTYANDKTIYRGALQSGRYHI
AHIPVSSRFLKNGDNTITLQLKGGSVMYDVVTLSEE
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcgatctgtcttgttgttggtgggggccatgctggcaccctatagctatagcgcg
caggataatgcggtgtcgttatccgtttctggtttgaataccgtgctggataacggtttg
ctgaaggtcgcattcggggaggatggcagcgcggtgagcatggtgacgggaggcaaaaat
atcgtcaccaacctgtccggcgcggcgcgcgatccgagcaaaacgcgtagcgcctacctc
gattactatattaacgatgctcatgctaaaggcgtcaaagattttgtccccgagcgagta
gaggtgctgcgcaacgatcgtgagatggcgcatgtcgcctatatcgacgatcgagacggg
ctgttacggcttgaatatcacctgattatgcgtcgcggtgttagcgggctttatagctat
gtcgttgctgaaaatagcggaacgcaggacgttaaagtcagtgaactacgtaacgtctat
cgcttcgatcccgctcggttagatcatctctacaatggcgatcgtcagggtaaaccgctg
ctctacagtcagcttgaagcgtcgccgaaggtgcaggatgaaacctggcgattgccggat
ggcagcatttattccaaatatgatttcgctggttacatgcgtgccgcgcctttctggggc
gttttcggcaacggcgtgggcgcgtggctgattcacggcaatcgggagtatttctctggc
gatgcgctcaagcaggatctgttggtgcatcaggatgcgatcatcctgaactacatgacg
ggttcgcatttcggcacgccggatatggtcgctccaccgggctggaaaaaattctacggt
ccgtggctgctgtatatcaatcagggcgacaccggacacatgctggcggatgttcagcgt
caggcgctgacggaagccgtcagttggccgtacaactgggtggacgattctcgctatgcg
cgcgagcgcacgcaggtgagtgggcgcgttgccagccagcagcccgtaaccgtcgtgctt
tcgtcatcgctggatgaaccatttgatgtgcaaacccgcggctattcgtatcaggcaacc
accgatgctcaggggaattttgcgctttcccatgtccgtccgggcaattaccatctggcg
gtatacgccaacagcggtacacagccgggaatatttgcagaacaaacgctgtccgtttcc
ggtgataagcaagtgctgcctgtgattgccctgcctaaagccgaaccggttgtgtgggcg
attggacaagccaatcggcaggcgagcgaattccgctttggcaatgaggcacgtaatacc
cgttggcagcatgaggttccggcaaacctgacgttcgatattggccgcagcgactatcag
cgtgactggtattacgcgcagaccaaaccggggaaatgggatatccgttttgccctgcaa
ccggagaagaaaacctattttctgaacattgcgttggcggccgcgagcaacagcggcatg
agtgagccgaccatgccacagctggcggtagcggtgaacggcaccacgttggaaacgctt
acttacgcaaacgacaaaaccatttatcgcggtgcgctacagagcggtcgttatcacatc
gcccatatccctgtgtcatcccgctttctgaaaaacggcgacaacacgatcacgctgcaa
ttaaaaggcggtagcgtaatgtacgacgtggtgaccttaagcgaggaataa
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