Pectobacterium carotovorum subsp. carotovorum PCC21: PCC21_008080
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Entry
PCC21_008080 CDS
T02320
Name
(GenBank) putative EBP family regulator
KO
K12266
anaerobic nitric oxide reductase transcription regulator
Organism
pcc
Pectobacterium carotovorum subsp. carotovorum PCC21
Brite
KEGG Orthology (KO) [BR:
pcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcc03000
]
PCC21_008080
Transcription factors [BR:
pcc03000
]
Prokaryotic type
Helix-turn-helix
Other families
PCC21_008080
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
GAF_2
AAA_5
Mg_chelatase
AAA
HTH_8
MCM
AAA_2
AAA_16
GAF_3
AAA_22
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AFR02211
LinkDB
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Position
918307..919845
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AA seq
512 aa
AA seq
DB search
MTLSINALARIAIELQMGLSNQDRFQRLINSLRQLLRCDASALLRYENQLFRPLAIDGLA
PDVLGRRFRLSDHPRLEAIARAGDVVRFPADSQLPDPYDGLIPSQEDLKVHACVGLPLFA
NQNLIGALTVDGMDPCQFDHFSDEELRLVGAMAAAALSNALLMERLERQLPAPVRAESPA
AESVEEMVGLSEPMQRLKKEVDIVAGSDLNVLIMGETGVGKELVARAIHRGSSRASHPLV
YLNCAALPESVAESELFGHVKGAFTGAIHHRTGKFEMADNGTLFLDEIGELSLTLQAKLL
RVLQYGDLQRVGDDSSLKVNVRVLAATNRDLRQAVLDGAFRADLFHRLSVFPLSVPPLRE
RSQDVALLAGFFCERSRVQLGLARLALTADAGALLEQYDWPGNVRELEHAIYRATVLARA
GQESGEVLLGPEHFNLELPSQPVHATSSSSSAIDTAPAYFISGGLREATDDYQRRIIQQT
LARHEGNWSSCARELEMDSGNLHRLAKRLGIK
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgacgctctctattaacgcccttgcccgtatcgctatcgaactgcaaatggggctatcg
aatcaggatcgtttccagcgcttaatcaacagcctgcgccagctgctgcgttgtgatgcc
tcggcgctgttgcgttacgagaatcagctgttccgcccgctggcgatcgacggtctggca
ccggatgtactggggcgacgctttcgcctgtccgatcatccccgtctggaggcgattgcc
cgcgcgggtgacgtggtgcgctttccggcggatagccagcttcccgatccctatgacggg
ctgatccctagtcaggaagatcttaaggtgcacgcctgcgtcggcctgccgctgtttgcc
aatcaaaacctgattggggcactgaccgtggacggtatggatccctgtcagttcgaccat
tttagcgatgaagaactgcggctggtgggggcgatggcggcagcagcgctaagtaacgcg
ctgctgatggagcgtcttgagcggcagttgcccgcgccggtccgtgctgaaagcccggcg
gcggaaagcgtcgaagaaatggttggactgtcggaaccgatgcagcgcttgaagaaagaa
gtcgatattgtcgcgggctccgatctgaacgtgctgatcatgggggaaaccggcgttggt
aaagagctggtggcgcgtgcaatccatcgtggttccagccgggcaagtcatcctctggtg
tacctgaactgtgccgcgctgccggagtcggtcgcggagagcgagctgtttgggcatgtg
aagggcgcgtttaccggtgcaatccatcaccgcactggcaagtttgaaatggcggataac
ggcacgctgtttctggatgagattggcgaactgtcgctgacgctacaggcgaagctgttg
cgcgtattgcagtatggtgatctccagcgtgtgggcgatgacagcagcctgaaagtgaac
gtgcgcgtgctggcggcgactaaccgcgatctgcggcaggctgtgctggatggggctttc
cgtgccgatttgttccaccgtctgagcgtgttcccgctgtctgtaccaccgctgcgtgag
cgcagtcaggatgtggcactgctggcgggattcttctgcgagcgcagccgcgtgcaactg
gggctggcgcgactggcgctgacggccgacgcgggcgcgctactggaacaatacgactgg
ccggggaatgtgcgcgagctggaacacgctatttatcgtgccaccgtgttggcgagagca
ggacaggaatcgggcgaagtgctgttaggccctgaacatttcaatcttgaacttccctcc
cagcctgttcatgcgacctccagttcatcgagcgctatcgacacggcacccgcgtatttc
atcagcggcggcctgcgggaggcaacggatgactatcagcgtcggatcatccaacaaacg
ctggcacgccatgagggcaactggtcatcctgcgccagagaactggaaatggacagcggc
aatctgcatcgtctggcgaagcggttgggcatcaaataa
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