Pectobacterium carotovorum subsp. carotovorum PCC21: PCC21_009030
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Entry
PCC21_009030 CDS
T02320
Name
(GenBank) Lytic transglycosylase catalytic
KO
K08306
peptidoglycan lytic transglycosylase C [EC:
4.2.2.29
]
Organism
pcc
Pectobacterium carotovorum subsp. carotovorum PCC21
Brite
KEGG Orthology (KO) [BR:
pcc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pcc01011
]
PCC21_009030
Enzymes [BR:
pcc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
PCC21_009030
Peptidoglycan biosynthesis and degradation proteins [BR:
pcc01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
PCC21_009030
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Gene cluster
GFIT
Motif
Pfam:
Mltc_N
SLT
SLT_4
Lysozyme_like
SLT_2
Phage_lysozyme2
Motif
Other DBs
NCBI-ProteinID:
AFR02306
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All DBs
Position
complement(1018498..1019562)
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AA seq
354 aa
AA seq
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MLALLVIAPLLVSCSGNKGNANDEEFLKDTNAFDILMGQFANNIENIWGMNEVLIAGPKD
YVKYTDQYKTRSHINFDAGSITIETISATNSVASLRQAIITTLLMGDDASNTDLYSDAND
IQISREPLLYGQVLDNTGQPIRWEGRAASFADYLLQNHLQKRTSGMHVIWSVTMQLVPNH
LDKRAHKYLPLVRKASERYGIEESLILAIMQTESSFNPYAVSRSDALGLMQVVQHSAGRD
VFKMKGKWGQPSRSYLFDPEQNIDAGTAYLSILKNSYLAGIENPTSKRYAVITAYNGGAG
SVLRVFSSDRDRAVGIINNMSPSDVYQTLTTKHPSGESRRYLYKVNTAQKNYRR
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgttagctctgctggtgattgcaccactgctggtttcctgttcaggaaacaaagggaat
gccaacgacgaagagtttctcaaggataccaacgccttcgatattttgatgggccagttc
gccaacaacatcgaaaatatctgggggatgaatgaagtactgatcgccggcccgaaagac
tacgtcaaatacaccgaccaatataagacgcgtagccacatcaactttgatgccggttca
atcacgatcgaaaccatttcggcaaccaattccgttgccagcctgcgccaggcgattatc
acgaccctgctgatgggcgatgacgccagtaacaccgatctgtattccgacgctaacgat
attcaaatcagccgcgaaccgctgctgtacggacaggtactggataacaccggacagccg
atccgctgggaaggccgtgccgccagctttgcagattacctgctccagaaccatctgcaa
aaacgcacctccggcatgcacgttatctggtcggtcacgatgcagcttgtccctaaccat
ctggataagcgtgcgcacaaatacctgccgctggtgcggaaagcctccgagcgttacggc
attgaagagtcgttgattctggcgattatgcagacagaatcgagcttcaacccttacgcc
gtcagccgttccgatgcgctgggcctgatgcaggtggtacagcacagcgcaggacgcgac
gtcttcaagatgaaagggaaatggggacagccaagccgcagctatctgttcgatccagaa
caaaacatcgacgcgggtaccgcctatctgtcgattctgaagaacagctatctggccggc
attgagaacccgacgtcgaaacgctatgccgtcatcaccgcgtataacggtggcgcaggc
agcgtgttgcgcgtcttctccagcgatcgcgatcgcgccgtgggcattatcaacaacatg
tcaccgagcgatgtctaccaaacgctgacgacgaagcacccgtctggtgaatcacgtcgc
tatctgtacaaagtgaacacggcacagaaaaattaccgccgctaa
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