Pectobacterium carotovorum subsp. carotovorum PCC21: PCC21_010400
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Entry
PCC21_010400 CDS
T02320
Name
(GenBank) ATPase involved in DNA repair
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pcc
Pectobacterium carotovorum subsp. carotovorum PCC21
Brite
KEGG Orthology (KO) [BR:
pcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcc03400
]
PCC21_010400
DNA repair and recombination proteins [BR:
pcc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PCC21_010400
Archaeal homologous recombinant proteins
PCC21_010400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_23
AAA_29
ABC_tran
cobW
Baculo_PEP_C
SMC_N
AAA_21
NTPase_1
nSTAND3
AAA_22
VirC1
Motif
Other DBs
NCBI-ProteinID:
AFR02443
LinkDB
All DBs
Position
complement(1186716..1190399)
Genome browser
AA seq
1227 aa
AA seq
DB search
MKILSLRLKNLNALKGEWKIDFTQEPFSSNGLFAITGPTGAGKTTLLDAICLALYHETPR
LGLLSASQNDLMTRNTAECLAEVEFEVKGVGYRAFWSQRRARNAPDGNLQSPKAELALIE
DGKILCEKLNDKKEMITQLTGLDFGRFTRSMMLSQGQFAAFLNAKADDRAELLEELTGTD
IYGLISERVYDKHKQANVALSTLQARASGIQLLTDDQRQQVEEQLAELLQQEQRGNVERE
QALTTLRWFEQLTQQHTQKTNTQAQHASAESAIQQAKPQLDRLTHSEPAEKLRPLHQERE
RYRQECLTLAQRIEQLIGKQAAEQVTLTALRQQEEKAERDVSEHKRVRQQQEQVINEQVV
PLDHRIATLEQQKAQQQDELAKTQARLHADERKQTQTATEQQQATQQLEQIQSYRRQHSH
HQQWGEQLPLWRTQFRQLRQLQDEQEKLEQKQALHTQEATARQQEADKLAAQLCGQQKVV
DGVRQQFMRHDETRQQQEAHQTLSALQQQFNQRIDQRAERQRLATISDQFQRLHVRKQQY
LAKQDEVQGHISQSEILKKQQQSEHEQRSQHLVDLETVYRQEERIVKLEAERQRLQAGEA
CPLCGSTEHPAIERYQALQPSETQQRLTALQQDVNQLTTALANTTAQLASLAQQRELLQQ
EIAQIDSEHHVLQQQWQDVSERLQVNYTLEQPDEIAAWLAQNEVEEQAIRQQITAREQLQ
KQWQESKDLLTAAEALQRELDQKIALNTQQQASLNVTQQEIDQSLQNVHQQITQHTQEIT
QTLATLNLPLPEADAQNDWLAQRENEWQDWKTKEQEQSRLVPLLATLESDLQHLNRSVAE
AKQQFQMQQQHQEQHLALLNASQQERLALFGDRQIATVREQLQRTSQQYDDALRLALSAR
QQAETTLSRLTGELASTQQQYEQSTRQHESATERFTQALQQSTFADETTFLNALLDEQER
QTLQTWKEELSQRLQQAAALHQQAERELLAHQQKRPASLTEDATQEAVQQQLAALDDTLK
TNLRQQGEFQRQLADDKQQRQNQQDLLNEIAQSQQMYDDWSCLNTLIGSQSGHKFRKFAQ
GLTLDHLVYLANLQLSRLHGRYMLKRKPGDDLELLVMDTWQADAERDTRTLSGGESFLVS
LSLALALSDLVSHKASIDSLFLDEGFGTLDAETLDIALDALDNLNASGKTIGVISHVEAM
KERIPVQIKVQKINGLGVSRLAPQYAV
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgaagattctcagtctgcgcttaaaaaaccttaatgcgttgaaaggcgaatggaagatc
gatttcacacaggagccattttccagcaacggcttatttgccattaccggcccgaccggc
gcggggaaaaccacgctgctggatgcgatctgtctggcgctataccacgaaacgccacgg
cttgggctgctttccgccagccagaatgacctgatgacgcgtaacaccgcagagtgcctt
gccgaagtcgagttcgaggtgaaaggcgtcggatatcgcgccttctggagccagcgtcgg
gcaagaaatgccccagacggcaatttgcagtctcccaaagccgaactcgcgctcattgaa
gacggcaagattctgtgtgaaaagctcaatgataagaaagagatgatcacacagctcacc
gggctggatttcggccgcttcacgcgatccatgatgctgtcacaaggccagtttgccgcc
ttcctcaacgctaaagcagacgaccgcgcggaactgctggaagagctgaccggcacggac
atttacggcctgatttccgaacgcgtctatgacaagcacaagcaggcaaacgtcgcactg
agcacgttacaggcacgcgcatctggcattcagcttttaaccgacgaccagcgtcagcag
gtggaagaacagcttgccgagctgctccagcaagagcaacggggcaacgtcgaacgtgag
caagcgctgactacgctgcgctggtttgagcaactgacgcagcagcacacgcagaaaacc
aatacgcaggcgcagcatgcgagcgccgaatccgccattcagcaggctaaaccgcagctc
gataggttaactcacagcgaaccagcagaaaaactgaggccactacatcaggaacgagag
cgctaccgacaggaatgtctcacgctggcacagcgtattgagcaactgatcgggaagcag
gccgccgaacaggtgacgttaaccgcgttacgccagcaggaagaaaaagcagagcgggat
gttagtgagcacaaacgggtacggcagcagcaagagcaggtaatcaacgaacaggttgtg
ccacttgaccatcgcattgccacgctggagcagcaaaaagcgcagcaacaggacgaactg
gcaaagacgcaggctcgtctgcacgccgatgaacgtaaacaaacccagacggcaacggaa
cagcagcaggctacacagcagcttgaacagatccagtcttaccgccggcaacactcgcac
catcaacagtggggagaacaacttcctctgtggcgcacccagtttcgccaactgcgccag
cttcaggacgaacaagagaagctggagcagaaacaagccctgcacacacaagaggcgacg
gcacggcagcaagaagccgacaagctagcggcacagttgtgtgggcaacagaaggtcgtt
gatggtgtgcgtcagcagttcatgcgacacgatgagacacggcaacagcaggaagcgcac
cagacgctttccgccctacagcagcagtttaatcaacgcattgaccagcgcgctgaacgc
caacggctcgcaacaatcagcgaccagttccagcgtctgcatgttcgcaagcaacagtac
ctcgccaaacaggatgaggtacaagggcatatcagccagtcagaaatcttaaagaaacag
cagcaatctgaacatgaacagcgcagccagcatctggtcgatctggaaacggtgtatcgg
caggaagagcgtatcgttaagctggaagccgaacgtcagcggttacaggccggagaagca
tgtccgctatgtggttcaaccgagcatcccgctattgaacgctatcaggcgctgcaaccg
tctgaaacccagcagcgcctgacggcgctacagcaggacgtgaaccagttaacgacagcg
ctggcgaatacgaccgcacagttggcctcgctagcgcaacagcgggaattgttgcaacag
gagatcgctcagatcgatagcgaacatcacgtcctgcagcaacagtggcaagatgtcagt
gagcgcttacaagttaactacacgttggaacagccagatgagatcgcggcctggcttgcg
caaaatgaagttgaagaacaggctattcgacagcagattaccgcacgcgagcaattgcaa
aagcagtggcaggaaagtaaggatttactaactgccgcagaggcattgcagcgggaactc
gaccagaaaatcgcgctgaatacccagcagcaagcctcgctaaacgttacgcagcaagaa
atcgatcagtcgctgcaaaacgtgcaccagcaaatcacacagcacactcaggaaatcacg
cagacgctggcgaccttaaatcttcctctgccggaggccgatgcccagaatgactggctg
gctcagcgcgagaacgagtggcaagactggaaaaccaaagagcaggagcaatctcgctta
gttcctctattagccacgctggaaagcgatcttcagcatctgaatcgcagcgtggccgag
gcaaaacagcagttccaaatgcagcaacagcaccaggagcagcaccttgcattgctcaat
gcgagccaacaagagcggctggcgttgtttggggacaggcagatcgctaccgtgcgcgaa
cagctacagcgcaccagccagcagtacgacgatgcactcaggctagccctgtcagctcgt
cagcaagccgaaacgacgttgagccgtctgacgggagagctggctagcacgcaacagcag
tatgaacagagcacgcgccagcatgagagtgcgaccgaacgctttactcaggcgttgcag
caaagcactttcgccgatgaaaccacgttcctcaatgcgctgcttgatgagcaggaacgc
cagacgttgcagacgtggaaggaagaactatctcagcgtttgcagcaggcggcggcactt
caccagcaggctgaacgtgagctgctcgcccatcaacaaaagcgccccgcttccctgacg
gaagacgccacacaagaagcggtacagcagcagttggcagcgctggatgacacgctgaaa
accaacctgaggcagcaaggcgagttccagcgtcagttggctgacgataaacaacagcgc
cagaatcagcaggatttactcaatgagatcgcccaaagtcagcaaatgtatgacgactgg
agctgtcttaatacgctcattggctcacaaagcgggcataaattccgtaagtttgctcag
gggctaacgttggatcatctggtttatctcgccaatctccagctttcccgcctgcacggg
cgctatatgctgaaacgtaaacccggcgacgatctggagctgctggtgatggatacctgg
caagcggacgccgagcgtgatacgcgcacgctgtccggcggcgagagcttcttagtgagt
ttgtcgctggcgctggcgctctccgatttggtcagccacaaagccagcatcgactcgctg
tttctggatgaaggcttcggcacgctggatgcagaaacgctggatatcgcactggatgcc
ctcgataacctgaacgcctccggtaaaaccatcggcgtcattagccatgtcgaagccatg
aaagagcgtattccggtacagatcaaagtgcagaagattaacgggttgggcgtcagccgg
ctggcgccgcagtacgccgtttaa
DBGET
integrated database retrieval system
