Pectobacterium carotovorum subsp. carotovorum PCC21: PCC21_010830
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Entry
PCC21_010830 CDS
T02320
Name
(GenBank) transcriptional regulator HU subunit beta
KO
K03530
DNA-binding protein HU-beta
Organism
pcc
Pectobacterium carotovorum subsp. carotovorum PCC21
Brite
KEGG Orthology (KO) [BR:
pcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcc03032
]
PCC21_010830
03036 Chromosome and associated proteins [BR:
pcc03036
]
PCC21_010830
03400 DNA repair and recombination proteins [BR:
pcc03400
]
PCC21_010830
DNA replication proteins [BR:
pcc03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PCC21_010830
Chromosome and associated proteins [BR:
pcc03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
PCC21_010830
DNA repair and recombination proteins [BR:
pcc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
PCC21_010830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
AFR02486
LinkDB
All DBs
Position
1237127..1237399
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSQLIDKIAADADISKAAAGRVLDAIIGSVTESLKEGDDVALVGFGTFSVRERAARTG
RNPQTGKEISIPAAKVPGFRAGKTLKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaagtcacaattgatcgacaaaattgccgcagatgctgatatttccaaagcggca
gcagggcgtgtgttagatgcaattattggttccgttaccgaatccctgaaagaaggggat
gatgttgctttggttggttttggtactttctcagtgcgtgaacgtgctgctcgtaccggc
cgtaacccgcaaactggtaaggaaatcagtatccctgcggcgaaagtaccaggattccgt
gctggtaaaactctgaaagacgccgttaactga
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