Pectobacterium carotovorum subsp. carotovorum PCC21: PCC21_012210
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Entry
PCC21_012210 CDS
T02320
Name
(GenBank) hypothetical protein
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
pcc
Pectobacterium carotovorum subsp. carotovorum PCC21
Brite
KEGG Orthology (KO) [BR:
pcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcc03016
]
PCC21_012210
Enzymes [BR:
pcc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
PCC21_012210
Transfer RNA biogenesis [BR:
pcc03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
PCC21_012210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
B12-binding
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
AFR02624
LinkDB
All DBs
Position
complement(1396214..1397638)
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AA seq
474 aa
AA seq
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MTKKLHIKTWGCQMNEYDSSKMADLLGSTHGYELTEIAEEADVLLLNTCSIREKAQEKVF
HQLGRWKTLKDLNPNLIIGVGGCVASQEGAHIRERAHYVDVIFGPQTLHRLPEMINHVQG
TRSPIVDISFPEIEKFDRLPEPRAEGPTAFVSIMEGCNKYCTFCVVPYTRGEEVSRPCDD
VLFEIAQLAAQGVREVNLLGQNVNAYRGETYDGEICSFAELLRLVAAIDGIDRVRFTTSH
PIEFTDDIISVYEDTPELVSFLHLPVQSGSDRVLTMMKRRHTALEYKAIIRKLHNARPGI
LISSDFIVGFPGETQADFEQTMKLITDVNFDMSYSFVYSARPGTPAADMVDDVPEEEKKQ
RLYLLQERITQQAMRFSRLMLGTVQRILVEGTSRKSVMELSGRTENNRVVNFEGTPDMIG
KFVDVEIVDVYTNSLRGIVVRTEDQMDLRVHESPSSVIARTRKENEIGVGFYQP
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaaaactgcatattaaaacctggggctgtcagatgaatgagtacgattcatca
aagatggctgatttactgggaagtacgcacggctatgagctgactgaaatcgctgaagaa
gccgatgtcctgctgctcaatacctgttcgatccgtgaaaaggcgcaggaaaaggtcttc
catcaacttggccgttggaaaacgctgaaagatctcaatccgaacctgattattggtgtc
ggtggctgtgtggcctcacaggaaggcgcgcatattcgtgaacgtgcgcactacgttgac
gttatttttggaccgcaaaccttgcaccgcctgccggaaatgattaatcacgtacagggc
acccgtagccctatcgttgatatcagtttccctgaaatcgaaaaattcgaccgcctgcca
gagccgcgagccgaagggccaacggctttcgtctccatcatggaaggctgcaataaatat
tgtacattctgcgttgtgccttatacccgcggcgaagaagtcagccgcccgtgcgatgat
gtgttgttcgaaatcgctcaactggccgcgcagggcgtgcgtgaagtcaaccttcttggg
cagaacgtcaacgcctatcgcggcgaaacctatgacggtgaaatctgctcctttgctgag
ctgctgcgtctggtcgccgctattgacgggatcgaccgcgtccgctttaccaccagccat
ccaattgaattcacagacgatattatcagcgtctatgaagatacgccggaactggtcagc
ttcctgcatttgccagtacaaagcggttccgaccgcgtgctgacgatgatgaaacgtcgt
cataccgcgctggaatacaaagcgatcatccgtaaactgcacaacgcgcgtccgggcatt
ctgatcagttctgactttatcgtcggtttccctggcgaaacgcaggctgactttgaacag
acgatgaagctgattaccgatgtgaatttcgatatgagctacagctttgtctactctgcc
cgtccgggaacaccggctgcggatatggtcgatgacgtgccggaagaagagaaaaaacag
cgtctgtatcttctgcaagagcgcatcacccagcaggccatgcggtttagccgcctcatg
ttgggcaccgtccagcgtattctggtagaaggcacctcacgtaagagcgtgatggagctg
tctggccgtacggaaaacaaccgcgtcgtcaactttgaaggcacgccagatatgatcggt
aaattcgtcgatgtggaaatcgttgatgtttataccaactcgctgcgcggcatcgtggtg
cgcaccgaagatcaaatggatctgcgcgtacatgaatcaccgtcttccgtgattgcgcgt
acccgcaaagagaatgagatcggcgtcgggttctatcagccgtaa
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