Pectobacterium carotovorum subsp. carotovorum PCC21: PCC21_012460
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Entry
PCC21_012460 CDS
T02320
Name
(GenBank) osmosensitive K+ channel signal transduction histidine kinase
KO
K07646
two-component system, OmpR family, sensor histidine kinase KdpD [EC:
2.7.13.3
]
Organism
pcc
Pectobacterium carotovorum subsp. carotovorum PCC21
Pathway
pcc02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pcc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PCC21_012460
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pcc01001
]
PCC21_012460
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pcc02022
]
PCC21_012460
Enzymes [BR:
pcc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
PCC21_012460
Protein kinases [BR:
pcc01001
]
Histidine kinases
OmpR family
PCC21_012460
Two-component system [BR:
pcc02022
]
OmpR family
KdpD-KdpE (potassium transport)
PCC21_012460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KdpD
DUF4118
HATPase_c
GAF_3
HisKA
Usp
GAF_2
LytR_cpsA_psr
Motif
Other DBs
NCBI-ProteinID:
AFR02649
LinkDB
All DBs
Position
complement(1423916..1426678)
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AA seq
920 aa
AA seq
DB search
MIDGEDRRPDPDSLLAQVGTPPRGKLKIFFGACAGVGKTYAMLQEAQRLRAQGLDILVGV
VETHGRSETAALLDGLPLLPLKHFRHHGRHTVEFDLDAALARCPALILIDELAHSNVNGS
RHPKRWQDVQELLDAGIDIFTTVNVQHLESLNDVVGGVTGIRVRETVPDPIFDQASEVIL
VDLPPDDLRQRLNEGKVYLPLQAERAVENFFRKGNLIALRELALRRMADRVDDQMRAMRA
GKGREQVWHTRDAILLCIGHGTGNEKLVRTAARLAARLGSAWHAVYVETPRLHRLPEPQR
RAILRALKLAQDLGAETVTLSEPDEELAVLRYAREHNLGKIVIGRHVEQRFGWWWRTRFA
ERLGRLGPDLDLVVVAVQDDAPATPIKTPDARGIVEKWRMQLFGCGLATLLCAFITLLAS
WSPFAMLEPVNLVMIYLLAVVIVALFFGRWPSVFAAVINVASFDLFFILPRGTFAVSDAQ
YLVTFAVMLGVGLLVGNLTAGVRYQARVARYREQRVRHLYEMSKALNRSLSSADIVEASQ
HFLSTTFQARIAVLLADSLHHTSPELAQPTRDGQQLIVDRAIARWSFDHRAPAGAGTSTL
PGVSYQILPLATTQQIFGVLAIEPNNARQLMIPEQQRLLETFTVLIANALERLHLMQSTE
NARLDAEREQLRNSLLAALSHDLRTPLTVLFGQAEILTLNLASEGSPYAQQANQIRQHIL
NTTRLVNNLLDMARIQSDGFNLRKEWQTPEELIGSALQQLESALAKNTIQVNLPDEMVLV
YCDAGLMERVFINLLENALKYAGEQATIAISASVIPTSLIAENTASQPGTQENALEIIVQ
DNGPGIEPGQESMIFDKFSRGHKESSIPGVGLGLAICRAIVEIHGGRIWATNAESGGAAF
HFTLPLSAPPDLEPEDIEEH
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgattgacggtgaagatcgtcgcccggatcccgatagcctgctagctcaggtcggtaca
ccaccgcgcggcaagctgaagatcttttttggcgcctgcgcgggcgtcgggaaaacctat
gccatgttgcaggaagcccagcggctacgcgctcaaggattggatatccttgtcggcgtg
gtcgaaacccacggccgtagcgaaaccgctgcgctgctggatggcttaccgctgctgccg
ctcaagcattttcgccaccacggtcgccacactgtcgaattcgatctggatgcggcgctg
gcacgttgtccggcgcttattctgatcgacgaactggcgcacagtaacgtcaacggctct
cgccacccaaaacgctggcaggacgtgcaggaactgctcgatgccggtatcgacatcttt
acgacagtgaacgttcagcatctggaaagcctgaacgatgtggtcggcggcgtcacggga
attcgcgtacgggaaaccgtaccggatcccatcttcgatcaggccagcgaagtgattttg
gtagacctgccgccggacgatctgcggcagcgcctgaatgagggcaaagtgtatctgccg
cttcaggccgagcgcgccgtcgagaattttttccgtaaaggtaatttgatcgccctgcgt
gagctggcgctgcggcgcatggcggatcgggttgacgatcagatgcgcgccatgcgtgcc
ggaaaaggacgcgaacaggtctggcatacgcgcgatgccattctgttatgcatcggccac
ggcacgggtaatgaaaaactggtgcgtacggccgcacggctagcggcacggttgggcagc
gcctggcacgccgtttacgtcgaaaccccgcgtctgcaccgcttgcctgaaccacagcgg
cgcgccatcttgcgggcgctcaagctggcacaggatttaggggcagaaaccgttacgctg
tcagaacccgacgaagagcttgccgtcctgcgctatgcacgtgaacataatctcggcaag
atcgttattggccgccacgtagagcagcgcttcggctggtggtggcgcacccgctttgcc
gaacggctcggccgactggggccggatctcgatctggtcgtggtggccgtgcaggatgac
gcgccagccacaccgattaaaacgcctgatgcccgcgggatagtagaaaaatggcgtatg
cagctgtttggctgcgggctcgccacgctgctgtgcgcctttatcaccctgctcgcgtca
tggtcgccgttcgccatgctggagccggtcaatctggtgatgatttatctgctggccgtg
gtgatcgtcgcgcttttctttggccgctggccgtcggtgttcgccgccgtcatcaacgtc
gccagttttgatctcttctttattctaccgcgcggcacgttcgccgtgtcggatgcgcaa
tatctggtcacctttgcggtgatgcttggcgtcggcctgctggtcggtaatctgaccgct
ggcgtgcgctatcaggccagagtcgcccgctatcgcgagcagcgcgtccgccatctgtat
gagatgtccaaggcgctgaaccgcagcctgtccagcgccgatattgtcgaagccagccag
cattttctcagcacgacgtttcaggccagaatcgcggttctgctcgccgatagcctgcat
catacgtcgcccgaactcgcacagcccacgcgggacggtcagcagttgattgtcgatcgt
gctatcgcccgctggagcttcgatcatcgcgcgccggccggcgcgggaacgtccaccttg
cccggcgtgtcgtatcagatcctgccgctcgccaccacacagcaaatcttcggcgtgtta
gcgatcgagcccaataacgctcgtcagttgatgatccccgaacagcagcgcctgctggaa
acctttaccgtgctgatcgccaatgcgttggagcgtctgcatctgatgcaaagtacggaa
aatgcccggctggatgccgagcgtgagcagttgcgtaactcgctgcttgccgcgctctcg
cacgacctccgcacgccgctgaccgtcctgtttggtcaggccgagattctaacgttgaat
ctggcaagcgaagggtcgccttatgctcagcaggccaaccagattcgccagcacatttta
aacaccacgcggctggtgaataatttgctcgatatggcgcgtattcagtcggacggcttt
aacctgcgcaaagagtggcaaacgccggaggaactcatcggcagtgccctacaacagttg
gaaagcgcactggcgaaaaacaccattcaggttaatctacctgatgagatggttctggtt
tattgtgatgcggggctgatggaacgcgtgttcattaacctgctggagaatgcgctgaag
tacgctggagagcaggccaccatcgcgatttcagcgagcgttattcccaccagccttatt
gcagagaacacagcctcgcagcctggtacgcaggaaaatgcgttggaaatcatcgtgcag
gacaatggcccggggattgaacctggtcaagaaagcatgatttttgataaattttcccgt
ggtcacaaagagtcgtcgattcccggcgtggggctggggctggcgatctgtcgggcaatt
gtggaaattcacggcggccgtatctgggcaacgaatgcggaaagcggcggtgccgctttc
cacttcacgctaccgctatcggcaccgccggatctcgaaccggaagatattgaggagcac
tga
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