Pectobacterium carotovorum subsp. carotovorum PCC21: PCC21_014580
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Entry
PCC21_014580 CDS
T02320
Name
(GenBank) ABC transporter related protein
KO
K14699
ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
Organism
pcc
Pectobacterium carotovorum subsp. carotovorum PCC21
Pathway
pcc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pcc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PCC21_014580
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcc02000
]
PCC21_014580
Transporters [BR:
pcc02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
PCC21_014580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_16
AAA_21
ABC_ATPase
AAA_22
nSTAND3
AAA_25
AAA_29
AAA_23
DUF6879
AAA_30
AAA_18
RsgA_GTPase
AAA_33
Zeta_toxin
AAA
AAA_19
AAA_28
TsaE
AAA_15
Motif
Other DBs
NCBI-ProteinID:
AFR02861
LinkDB
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Position
1677689..1679461
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AA seq
590 aa
AA seq
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MNKNHTVITTQLSAWWHTYRQLERVTGSQSRLFRRCCVSLLAAAVAQGLALACLFPLLSA
FTHAAASREIAMWLLLMTFLSLLTLALRWYGQGFEYRGQLAAATHELRMRLGEQLRSMPL
TTLQSARAGDINALLLGSVDENLNYMLAIVNQLLLAIVTPLVIALVMLMVEWRLGVSLLL
IFPAIALLYRWRRPAFAHTMQALAEANQQTSADIVEYVQGLAVLRTSCQQAERTSALRKR
FQHLQQIQTSAHRSGAKPGAVVASVVELGLQGVLILGISGVVVGPWDIAIVAAMMVIVVR
FSEPLATFVSYTAVLELINTALRRIDDLLAIEPLPVHRPVDVPLTYAVTFEQVSFRYANE
AEAVLDSVDIVLPEKGMTALVGPSGSGKTTITRLLMRHADPQHGRVCIGGVDIRHIPTRE
VNRLISVVFQDVYLFDDSVLANIRMARPDASDAEVERAAEAAQCLDFIQRLPQGWQTRLG
DIGGRLSGGERQRISIARALLKDAPIVILDEPTAALDTESELAVQRAIDRLVQDKTVIVI
AHRLSTIVGAHRILVVENGGISQQGTHSELLHAEGRYRALWNAQQSISLR
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaaaccataccgtcataacgacgcagttatccgcatggtggcacacgtatcgt
cagctggagcgggtgacgggttcacaatctcgactgttccgtcggtgttgcgtaagcctg
ctggcagcggctgttgcgcaggggttagcgctggcgtgcctgtttccgctgctgtcggcg
ttcacccacgcggcggcttcccgcgagatagcgatgtggctgctactgatgacatttctt
agcctgttgacgctggcgctgcgttggtatggtcaaggatttgaatatcgcgggcagctt
gcggcggcaacccatgaactgcgtatgcgtctgggagaacagttgcggagtatgccgcta
accacgctccagtccgcgcgggcgggggatatcaacgcgctgctgctgggcagcgtggat
gagaacctgaactatatgctggcgatagtaaaccagctgctgctggctatcgtgacgccc
ctcgtgatagcgctcgtcatgctgatggtggagtggcgattgggtgtgagtttactgctg
atctttcccgctatcgcgctgctttatcgctggcggcgaccggcatttgcgcacacgatg
caggcgctggcggaggcgaatcagcaaaccagcgccgatattgtggaatatgtgcagggg
ctcgccgtcctgagaaccagctgtcagcaggctgaacgtacatcggcgctgcgtaagcgt
tttcagcatctacagcagatacaaacgtcggctcaccgcagcggtgccaaacccggtgcg
gtggttgccagcgtcgtggagttaggtcttcagggcgtactgattctgggtatcagtggc
gttgtggtgggcccgtgggatatagctatcgtcgccgcgatgatggtgatagtggttcgc
ttctctgaaccgctggcgacgtttgtcagctatacggccgtgctggaattgattaatacg
gcgctgcgccgcattgacgatttgctggcgattgaaccgcttcccgtacatcgacctgtc
gacgtgccgctgacgtatgcggttacgttcgagcaggtgagttttcgctatgccaacgaa
gctgaggcggtgctcgatagcgtggacattgtgctgccggagaaggggatgacggcgttg
gtcgggccgtcgggctcggggaaaacgacgataacgcgattgctcatgcgccatgcggat
ccgcaacacggacgcgtgtgtatcgggggcgtggacattaggcacattccaacgcgtgaa
gtaaatcggctgatttccgtggtgtttcaggatgtctacctgtttgatgattcagtgctg
gcaaacattcggatggcgcgtccggatgccagcgacgcagaggtcgagcgggctgccgag
gctgcccagtgtctggactttattcagcggctgccgcagggatggcaaacgcggctgggc
gatattggcggcagattatccggcggcgaacggcagcgtatttcgattgcgcgagcctta
ttgaaggacgcgccgattgtgattctggacgaaccgacggcggcgttggataccgaaagc
gagctcgccgtacagcgggcgattgaccggctggttcaggacaagacggttattgtcatc
gcacatcgtctatcgacaattgtgggcgcacatcgaattctggttgtcgagaatggaggt
atttcccagcagggaacgcatagcgaattactgcatgctgaaggccgttatcgcgcgttg
tggaacgcgcagcagtctatctcactaaggtga
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